RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 TRAPPC6AO75865 159 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 C1QL1O75973 258 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 GKN3PP0CG01 181 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 ME2P23368 584 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 DPP4P27487 766 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 KCNJ5P48544 419 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 P2RX1P51575 399 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 CCR4P51679 360 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 DSCR4P56555 118 aaPredicted RBP11.5□□□□□ -0.57
SMN1-202ENST00000380707 FOXK1P85037 733 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 TOMM20Q15388 145 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 TOMM34Q15785 309 aaPredicted RBP11.5□□□□□ -0.57
SMN1-202ENST00000380707 CYBRD1Q53TN4 286 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 PGM2L1Q6PCE3 622 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 GRAMD2AQ8IUY3 354 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 ZNF843Q8N446 348 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 FAM109AQ8N4B1 249 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 FAM83FQ8NEG4 500 aaPredicted RBP11.5□□□□□ -0.57
SMN1-202ENST00000380707 GPR32P1Q8NGA4 272 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 OR10Q1Q8NGQ4 319 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 OR5W2Q8NH69 310 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 GPR119Q8TDV5 335 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 SLC26A7Q8TE54 656 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 C1GALT1C1Q96EU7 318 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 PINK1Q9BXM7 581 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 LRMDAQ9H2I8 198 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 PTGES2Q9H7Z7 377 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 HHATLQ9HCP6 504 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 EXOSC3Q9NQT5 275 aaKnown RBP11.5□□□□□ -0.57
SMN1-202ENST00000380707 OLAHQ9NV23 265 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 NPIPA1Q9UND3 350 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 ZNF462Q96JM2 2506 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 ANKUB1A6NFN9 424 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 ARPC2O15144 300 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 WISP1O95388 367 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 NUDT14O95848 222 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 LGI1O95970 557 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 SERPINA1P01009 418 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 HPNP05981 417 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 FESP07332 822 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 PRG2P13727 222 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 TCEA1P23193 301 aaKnown RBP11.5□□□□□ -0.57
SMN1-202ENST00000380707 SRD5A2P31213 254 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 RYKP34925 604 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 HOXC5Q00444 222 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 MS4A2Q01362 244 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 CBFBQ13951 182 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 SLC10A1Q14973 349 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 ZSWIM7Q19AV6 140 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 EIPR1Q53HC9 387 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 ASRGL1Q7L266 308 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 YRDCQ86U90 279 aaKnown RBP11.5□□□□□ -0.57
SMN1-202ENST00000380707 BHLHE22Q8NFJ8 381 aaPredicted RBP11.5□□□□□ -0.57
SMN1-202ENST00000380707 CPT1CQ8TCG5 803 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 NR4A3Q92570 626 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 FAM162AQ96A26 154 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 CCDC124Q96CT7 223 aaKnown RBP11.5□□□□□ -0.57
SMN1-202ENST00000380707 NPAS1Q99742 590 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 ARMC7Q9H6L4 198 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 GORASP2Q9H8Y8 452 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 QPCTLQ9NXS2 382 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 TAS2R10Q9NYW0 307 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 DKKL1Q9UK85 242 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 VDAC3Q9Y277 283 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 SNX13Q9Y5W8 968 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 LIPGQ9Y5X9 500 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 HEATR5AQ86XA9 2040 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 CFAP73A6NFT4 308 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 AP3D1O14617 1153 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 GMNNO75496 209 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 IFNA14P01570 189 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 C8BP07358 591 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 LINGO3P0C6S8 592 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 ACAA2P42765 397 aaKnown RBP11.49□□□□□ -0.57
SMN1-202ENST00000380707 SUMO3P55854 103 aaPredicted RBP11.49□□□□□ -0.57
SMN1-202ENST00000380707 SELENOWP63302 87 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 BNIP2Q12982 314 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 TRIM25Q14258 630 aaKnown RBP11.49□□□□□ -0.57
SMN1-202ENST00000380707 GANABQ14697 944 aaKnown RBP11.49□□□□□ -0.57
SMN1-202ENST00000380707 WIPI1Q5MNZ9 446 aaPredicted RBP11.49□□□□□ -0.57
SMN1-202ENST00000380707 ULK2Q8IYT8 1036 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 TOR1AIP2Q8NFQ8 470 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 RASSF5Q8WWW0 418 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 TPD52L3Q96J77 140 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 SLX1AQ9BQ83 275 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 OR2B2Q9GZK3 357 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 ACKR4Q9NPB9 350 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 AGPAT4Q9NRZ5 378 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 DCAF13Q9NV06 445 aaKnown RBP11.49□□□□□ -0.57
SMN1-202ENST00000380707 MED17Q9NVC6 651 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 MAGEL2Q9UJ55 1249 aa11.49□□□□□ -0.57
SMN1-202ENST00000380707 RPH3AQ9Y2J0 694 aaPredicted RBP11.49□□□□□ -0.57
SMN1-202ENST00000380707 MRPS18CQ9Y3D5 142 aaKnown RBP11.49□□□□□ -0.57
SMN1-202ENST00000380707 RP1L1Q8IWN7 2480 aaPredicted RBP11.49□□□□□ -0.57
SMN1-202ENST00000380707 SHISA8B8ZZ34 492 aa11.48□□□□□ -0.57
SMN1-202ENST00000380707 B8ZZF3 427 aa11.48□□□□□ -0.57
SMN1-202ENST00000380707 M0R3H8 397 aa11.48□□□□□ -0.57
SMN1-202ENST00000380707 SYT5O00445 386 aa11.48□□□□□ -0.57
SMN1-202ENST00000380707 TPST2O60704 377 aa11.48□□□□□ -0.57
SMN1-202ENST00000380707 ZNF682O95780 498 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms