RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 GPR52Q9Y2T5 361 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 THADAQ6YHU6 1953 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 IGHV1OR21-1A0A087WYE8 117 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 DYRK3O43781 588 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 NTN1O95631 604 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 IGKV1D-16P01601 117 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 CRYBB2P43320 205 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 COPZ1P61923 177 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 TPBGQ13641 420 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 NPSR1Q6W5P4 371 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 LAPTM4BQ86VI4 370 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 C16orf52Q8NHV5 167 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 CNPPD1Q9BV87 410 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 DPH1Q9BZG8 443 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 CAPN10Q9HC96 672 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 GALNT8Q9NY28 637 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 CRNNQ9UBG3 495 aaPredicted RBP21.34■■□□□ 1.01
VPS16-201ENST00000380443 ERVK-19Q9WJR5 959 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 A0A1B0GWA3 101 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 OR2B3O76000 313 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 IFNA16P05015 189 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 CT45A8P0DMV1 189 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 CT45A9P0DMV2 189 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 GLB1P16278 677 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 MAKP20794 623 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 AVPR2P30518 371 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 PLAURQ03405 335 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 COL9A2Q14055 689 aaPredicted RBP21.33■■□□□ 1.01
VPS16-201ENST00000380443 ERV3-1Q14264 604 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 CT45A2Q5DJT8 189 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 ULK3Q6PHR2 472 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 UCKL1Q9NWZ5 548 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 SLC35A3Q9Y2D2 325 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 OR10H1Q9Y4A9 318 aa21.33■■□□□ 1.01
VPS16-201ENST00000380443 PNMA8CA0A1B0GUJ8 204 aa21.32■■□□□ 1
VPS16-201ENST00000380443 SYNDIG1LA6NDD5 238 aa21.32■■□□□ 1
VPS16-201ENST00000380443 TMEM150CB9EJG8 249 aa21.32■■□□□ 1
VPS16-201ENST00000380443 H3BMH7 237 aa21.32■■□□□ 1
VPS16-201ENST00000380443 BHLHE40O14503 412 aa21.32■■□□□ 1
VPS16-201ENST00000380443 CDC123O75794 336 aaPredicted RBP21.32■■□□□ 1
VPS16-201ENST00000380443 IGHA1P01876 353 aa21.32■■□□□ 1
VPS16-201ENST00000380443 DCNP07585 359 aaKnown RBP21.32■■□□□ 1
VPS16-201ENST00000380443 TSPAN19P0C672 248 aa21.32■■□□□ 1
VPS16-201ENST00000380443 MAOAP21397 527 aa21.32■■□□□ 1
VPS16-201ENST00000380443 SOX3P41225 446 aa21.32■■□□□ 1
VPS16-201ENST00000380443 ACSM1Q08AH1 577 aa21.32■■□□□ 1
VPS16-201ENST00000380443 SMARCD3Q6STE5 483 aa21.32■■□□□ 1
VPS16-201ENST00000380443 CXXC5Q7LFL8 322 aaKnown RBP21.32■■□□□ 1
VPS16-201ENST00000380443 SLITRK4Q8IW52 837 aa21.32■■□□□ 1
VPS16-201ENST00000380443 CENPSQ8N2Z9 138 aa21.32■■□□□ 1
VPS16-201ENST00000380443 PFN4Q8NHR9 129 aa21.32■■□□□ 1
VPS16-201ENST00000380443 RNF217Q8TC41 542 aa21.32■■□□□ 1
VPS16-201ENST00000380443 SIGLEC7Q9Y286 467 aa21.32■■□□□ 1
VPS16-201ENST00000380443 ZNF670-ZNF695F2Z2N8 137 aa21.32■■□□□ 1
VPS16-201ENST00000380443 ZGLP1P0C6A0 271 aa21.32■■□□□ 1
VPS16-201ENST00000380443 OCM2P0CE71 109 aa21.32■■□□□ 1
VPS16-201ENST00000380443 OCMP0CE72 109 aaPredicted RBP21.32■■□□□ 1
VPS16-201ENST00000380443 TBXA2RP21731 343 aa21.32■■□□□ 1
VPS16-201ENST00000380443 GPR143P51810 404 aa21.32■■□□□ 1
VPS16-201ENST00000380443 LINC00114Q6XXX2 140 aa21.32■■□□□ 1
VPS16-201ENST00000380443 HSDL2Q6YN16 418 aa21.32■■□□□ 1
VPS16-201ENST00000380443 QSOX2Q6ZRP7 698 aa21.32■■□□□ 1
VPS16-201ENST00000380443 D2HGDHQ8N465 521 aa21.32■■□□□ 1
VPS16-201ENST00000380443 ZNF614Q8N883 585 aa21.32■■□□□ 1
VPS16-201ENST00000380443 BCORP1Q8N888 145 aa21.32■■□□□ 1
VPS16-201ENST00000380443 TMEM105Q8N8V8 129 aa21.32■■□□□ 1
VPS16-201ENST00000380443 OR4N2Q8NGD1 307 aa21.32■■□□□ 1
VPS16-201ENST00000380443 MROQ9BYG7 248 aa21.32■■□□□ 1
VPS16-201ENST00000380443 LANCL2Q9NS86 450 aa21.32■■□□□ 1
VPS16-201ENST00000380443 FLRT3Q9NZU0 649 aa21.32■■□□□ 1
VPS16-201ENST00000380443 RPS6KB2Q9UBS0 482 aa21.32■■□□□ 1
VPS16-201ENST00000380443 MN1Q10571 1320 aaPredicted RBP21.31■■□□□ 1
VPS16-201ENST00000380443 CEP192Q8TEP8 1941 aa21.31■■□□□ 1
VPS16-201ENST00000380443 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.31■■□□□ 1
VPS16-201ENST00000380443 ISPDA4D126 451 aa21.31■■□□□ 1
VPS16-201ENST00000380443 SERINC4A6NH21 518 aa21.31■■□□□ 1
VPS16-201ENST00000380443 HRKO00198 91 aa21.31■■□□□ 1
VPS16-201ENST00000380443 POLR1CO15160 346 aaPredicted RBP21.31■■□□□ 1
VPS16-201ENST00000380443 SDC3O75056 442 aa21.31■■□□□ 1
VPS16-201ENST00000380443 PTP4A3O75365 173 aa21.31■■□□□ 1
VPS16-201ENST00000380443 CH25HO95992 272 aa21.31■■□□□ 1
VPS16-201ENST00000380443 LCN1P31025 176 aa21.31■■□□□ 1
VPS16-201ENST00000380443 ADH7P40394 386 aa21.31■■□□□ 1
VPS16-201ENST00000380443 ETV6P41212 452 aa21.31■■□□□ 1
VPS16-201ENST00000380443 RFX3P48380 749 aa21.31■■□□□ 1
VPS16-201ENST00000380443 NUBP1P53384 320 aa21.31■■□□□ 1
VPS16-201ENST00000380443 PLK5Q496M5 336 aa21.31■■□□□ 1
VPS16-201ENST00000380443 ZC3H14Q6PJT7 736 aaKnown RBP21.31■■□□□ 1
VPS16-201ENST00000380443 PAQR6Q6TCH4 344 aa21.31■■□□□ 1
VPS16-201ENST00000380443 PRSS42Q7Z5A4 293 aa21.31■■□□□ 1
VPS16-201ENST00000380443 OR52N1Q8NH53 320 aa21.31■■□□□ 1
VPS16-201ENST00000380443 DNAJA4Q8WW22 397 aaPredicted RBP21.31■■□□□ 1
VPS16-201ENST00000380443 UFD1Q92890 307 aa21.31■■□□□ 1
VPS16-201ENST00000380443 LRFN5Q96NI6 719 aa21.31■■□□□ 1
VPS16-201ENST00000380443 SLC46A1Q96NT5 459 aa21.31■■□□□ 1
VPS16-201ENST00000380443 COQ7Q99807 217 aa21.31■■□□□ 1
VPS16-201ENST00000380443 ARHGAP9Q9BRR9 750 aa21.31■■□□□ 1
VPS16-201ENST00000380443 ASPNQ9BXN1 380 aa21.31■■□□□ 1
VPS16-201ENST00000380443 C6orf62Q9GZU0 229 aaPredicted RBP21.31■■□□□ 1
VPS16-201ENST00000380443 EXOSC4Q9NPD3 245 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms