RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 POU6F2P78424 691 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF45Q02386 682 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF155Q12901 538 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 EIPR1Q53HC9 387 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 SLC35F1Q5T1Q4 408 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 TUBA3EQ6PEY2 450 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 RANBP3LQ86VV4 465 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 CPOQ8IVL8 374 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 MCATQ8IVS2 390 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 VWA5B2Q8N398 1253 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF614Q8N883 585 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 C19orf47Q8N9M1 422 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 ZBTB8BQ8NAP8 495 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF485Q8NCK3 441 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 CNOT9Q92600 299 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 HTRA1Q92743 480 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 OTULINQ96BN8 352 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 PEX11GQ96HA9 241 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 DCLRE1CQ96SD1 692 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 MAP3K3Q99759 626 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 HCAR1Q9BXC0 346 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 OR52D1Q9H346 318 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 UBQLN3Q9H347 655 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 CACYBPQ9HB71 228 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 ERVK13-1Q9NX77 482 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 TOR4AQ9NXH8 423 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 LUZP4Q9P127 313 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 PAIP2BQ9ULR5 123 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 SSR3Q9UNL2 185 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 SF3B6Q9Y3B4 125 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 PCDHGB6Q9Y5F9 930 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 SYNDIG1LA6NDD5 238 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 FOXS1O43638 330 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 OR10H2O60403 315 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 CDRT1O95170 752 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 SLC35E2P0CK97 266 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 IFI30P13284 250 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 TBXA2RP21731 343 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 EMDP50402 254 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 BTG2P78543 158 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 BNC1Q01954 994 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 FZD5Q13467 585 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 LRIT3Q3SXY7 679 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 PDZK1Q5T2W1 519 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 ARMC6Q6NXE6 501 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 SMARCD3Q6STE5 483 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 THSD4Q6ZMP0 1018 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 TDHQ8IZJ6 230 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 METTL27Q8N6F8 245 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 SYT14Q8NB59 555 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 PSD4Q8NDX1 1056 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 OR2T33Q8NG76 320 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 GRHL3Q8TE85 626 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 TMEM239Q8WW34 195 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 PTCHD1Q96NR3 888 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 SMURF1Q9HCE7 757 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 MEPEQ9NQ76 525 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 C14orf119Q9NWQ9 140 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 SIDT1Q9NXL6 827 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 CDH10Q9Y6N8 788 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 ASXL3Q9C0F0 2248 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 SEC16AO15027 2179 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 A0A075B6Q4 140 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 IGHV1OR15-9A0A0B4J2B8 117 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 TMEM129A0AVI4 362 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 RGS5O15539 181 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 HYAL3O43820 417 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 PRKNO60260 465 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 NKX2-2O95096 273 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 TSPAN19P0C672 248 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 ETV6P41212 452 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 SLC1A3P43003 542 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 CSTF1Q05048 431 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 FAM53BQ14153 422 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 INSL4Q14641 139 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF181Q2M3W8 571 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF791Q3KP31 576 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 ZMAT1Q5H9K5 638 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 FCRLBQ6BAA4 426 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 PLBD1Q6P4A8 553 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 GDPGP1Q6ZNW5 385 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 SYT13Q7L8C5 426 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 LAPTM4BQ86VI4 370 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 LAX1Q8IWV1 398 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 ARL14Q8N4G2 192 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 SIRT6Q8N6T7 355 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 LINC00469Q8N7U9 141 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 POC5Q8NA72 575 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 C1GALT1C1Q96EU7 318 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 FLRT3Q9NZU0 649 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF229Q9UJW7 825 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 TMEM184BQ9Y519 407 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 CLDN16Q9Y5I7 305 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 CACNA1IQ9P0X4 2223 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 MPDZO75970 2070 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 UNC119BA6NIH7 251 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 BHLHE40O14503 412 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 GLULP15104 373 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 CD97P48960 835 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms