RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 LINC01387J3KSC0 135 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 ETV2O00321 342 aaPredicted RBP16.97■□□□□ 0.31
SSU72-203ENST00000378725 PSME3P61289 254 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 CBFBQ13951 182 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 VEZF1Q14119 521 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 GXYLT1Q4G148 440 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 EMC4Q5J8M3 183 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 ZNF311Q5JNZ3 666 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 ERICH5Q6P6B1 374 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 AAGABQ6PD74 315 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 ZNF836Q6ZNA1 936 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 CCDC80Q76M96 950 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 DOLPP1Q86YN1 238 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 CLIP4Q8N3C7 705 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 GTPBP8Q8N3Z3 284 aaPredicted RBP16.97■□□□□ 0.31
SSU72-203ENST00000378725 ZNF524Q96C55 264 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 ZNF607Q96SK3 696 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 PIGQQ9BRB3 760 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 SPATA5L1Q9BVQ7 753 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 CACYBPQ9HB71 228 aaKnown RBP16.97■□□□□ 0.31
SSU72-203ENST00000378725 DNAJB12Q9NXW2 375 aaKnown RBP16.97■□□□□ 0.31
SSU72-203ENST00000378725 ABCD2Q9UBJ2 740 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 PRDM4Q9UKN5 801 aa16.97■□□□□ 0.31
SSU72-203ENST00000378725 CCT8L1PA6NM43 557 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 NME4O00746 187 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 PRRG2O14669 202 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 SERPINB7O75635 380 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 CYP7B1O75881 506 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 MFN2O95140 757 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 T-ENOLP0DO92 83 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 ESRRAP11474 423 aaPredicted RBP16.96■□□□□ 0.31
SSU72-203ENST00000378725 ZNF17P17021 662 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 PSMA4P25789 261 aaKnown RBP16.96■□□□□ 0.31
SSU72-203ENST00000378725 PRKAR1BP31321 381 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 GCKP35557 465 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 CA7P43166 264 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 ZNF41P51814 821 aaPredicted RBP16.96■□□□□ 0.31
SSU72-203ENST00000378725 MNAT1P51948 309 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 SLC7A2P52569 658 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 DLX5P56178 289 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 TOMM34Q15785 309 aaPredicted RBP16.96■□□□□ 0.31
SSU72-203ENST00000378725 C3AR1Q16581 482 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 SLC25A53Q5H9E4 307 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 DHRS4L2Q6PKH6 230 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 TRPM8Q7Z2W7 1104 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 POC1BQ8TC44 478 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 RELTQ969Z4 430 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 SFXN2Q96NB2 322 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 NPAS1Q99742 590 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 PRDM14Q9GZV8 571 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 ARMC7Q9H6L4 198 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 RLIMQ9NVW2 624 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 TMEM181Q9P2C4 612 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 TNFRSF10DQ9UBN6 386 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 ACAD8Q9UKU7 415 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 USP22Q9UPT9 525 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 VDAC3Q9Y277 283 aa16.96■□□□□ 0.31
SSU72-203ENST00000378725 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 OR2M5A3KFT3 312 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 PRORSD1PA6NEY8 169 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 FAM47E-STBD1D6RA91 191 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 M0QX08 132 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 FAAHO00519 579 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 ADAM11O75078 769 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 NTN1O95631 604 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 TPOP07202 933 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 CPN1P15169 458 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 PGCP20142 388 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 ADH6P28332 368 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 AQP1P29972 269 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 EIF1P41567 113 aaKnown RBP16.95■□□□□ 0.3
SSU72-203ENST00000378725 SLC6A8P48029 635 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 LHX2P50458 406 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 EEFSECP57772 596 aaKnown RBP16.95■□□□□ 0.3
SSU72-203ENST00000378725 LIPEQ05469 1076 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 QPRTQ15274 297 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 BCL2A1Q16548 175 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 DCST1Q5T197 706 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 WLSQ5T9L3 541 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 INTS11Q5TA45 600 aaKnown RBP16.95■□□□□ 0.3
SSU72-203ENST00000378725 PATL1Q86TB9 770 aaKnown RBP16.95■□□□□ 0.3
SSU72-203ENST00000378725 ZNF440Q8IYI8 595 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 TMCO5AQ8N6Q1 288 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 OR2T12Q8NG77 320 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 FBXO27Q8NI29 283 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 SLC35B4Q969S0 331 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 WDYHV1Q96HA8 205 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 PNPLA3Q9NST1 481 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 ZNF337Q9Y3M9 751 aa16.95■□□□□ 0.3
SSU72-203ENST00000378725 A0A1B0GUH1 482 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 ELOVL7A1L3X0 281 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 SHISA8B8ZZ34 492 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 NUDT14O95848 222 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 PRKCAP17252 672 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 CALB2P22676 271 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 TCEA1P23193 301 aaKnown RBP16.94■□□□□ 0.3
SSU72-203ENST00000378725 ACAA2P42765 397 aaKnown RBP16.94■□□□□ 0.3
SSU72-203ENST00000378725 CASP6P55212 293 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 DMTNQ08495 405 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 RAET1LQ5VY80 246 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms