RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 TNFSF8P32971 234 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 BMPR1AP36894 532 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 STK19P49842 368 aaPredicted RBP8.27□□□□□ -1.09
LIG3-202ENST00000378526 PIGPP57054 158 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 PLP1P60201 277 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 PRPS1P60891 318 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 TMEM198Q66K66 360 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 CLDN22Q8N7P3 220 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 TOMM40LQ969M1 308 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 APH1AQ96BI3 265 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 POU2F3Q9UKI9 436 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 RTCAO00442 366 aaKnown RBP8.26□□□□□ -1.09
LIG3-202ENST00000378526 TACR3P29371 465 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 RBP2P50120 134 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 CLCNKAP51800 687 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 SLC35A2P78381 396 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 MPPED2Q15777 294 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 RPE65Q16518 533 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 HIST3H3Q16695 136 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 LYPD4Q6UWN0 246 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 ABI3BPQ7Z7G0 1075 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 LSMEM1Q8N8F7 131 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 ZNF778Q96MU6 729 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 DOCK11Q5JSL3 2073 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 PZPP20742 1482 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 F5H5K5 113 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 AP4M1O00189 453 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 BUD23O43709 281 aaKnown RBP8.26□□□□□ -1.09
LIG3-202ENST00000378526 GRIN3BO60391 1043 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 OR10J4P0C629 311 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 NMBRP28336 390 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 PPOXP50336 477 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 AAK1Q2M2I8 961 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 CYP27C1Q4G0S4 372 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 ZNF343Q6P1L6 599 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 DHRS13Q6UX07 377 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 MDGA2Q7Z553 956 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 IL17RCQ8NAC3 791 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 PWWP2AQ96N64 755 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 CTRCQ99895 268 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 FBXL2Q9UKC9 423 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 PSAT1Q9Y617 370 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 HSBP1O75506 76 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 UBL3O95164 117 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 TTRP02766 147 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 MGMTP16455 207 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 NDUFS1P28331 727 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 SSTR4P31391 388 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 SOX3P41225 446 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 SEC61A1P61619 476 aaKnown RBP8.26□□□□□ -1.09
LIG3-202ENST00000378526 BAXQ07812 192 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 TAF1CQ15572 869 aaPredicted RBP8.26□□□□□ -1.09
LIG3-202ENST00000378526 CTSL3PQ5NE16 218 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 PLEKHH3Q7Z736 793 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 TRAPPC6BQ86SZ2 158 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 CDS1Q92903 461 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 SFXN2Q96NB2 322 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 CLEC3AO75596 197 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 AIFM1O95831 613 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 EBLN1P0CF75 366 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 AANATQ16613 207 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 TOR2AQ5JU69 321 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 OR5L2Q8NGL0 311 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 RPH3ALQ9UNE2 315 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 A3GALT2U3KPV4 340 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 C5orf52A6NGY3 159 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 A8MUA0 341 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 H3BSH0 61 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 SLC16A6O15403 523 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 PIRTP0C851 137 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 PIM1P11309 404 aaPredicted RBP8.26□□□□□ -1.09
LIG3-202ENST00000378526 OSMP13725 252 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 KDELR2P33947 212 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 GJA4P35212 333 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 NDUFV1P49821 464 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 PIGFQ07326 219 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 SNAPC2Q13487 334 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 ATP6V1FQ16864 119 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 SLC6A19Q695T7 634 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 PRSS42Q7Z5A4 293 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 RBMXL3Q8N7X1 1067 aaKnown RBP8.26□□□□□ -1.09
LIG3-202ENST00000378526 MYOZ2Q9NPC6 264 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 ARHGEF17Q96PE2 2063 aaPredicted RBP8.26□□□□□ -1.09
LIG3-202ENST00000378526 NEMP2A6NFY4 417 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 ZNF264O43296 627 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 NIPSNAP2O75323 286 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 OPN1SWP03999 348 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 CCR7P32248 378 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 SRP9P49458 86 aaKnown RBP8.26□□□□□ -1.09
LIG3-202ENST00000378526 P2RX3P56373 397 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 KIAA1024LP59773 190 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 MAXP61244 160 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 FOXO1Q12778 655 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 FBXW12Q6X9E4 464 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 TMEM156Q8N614 296 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 SLC39A7Q92504 469 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 SLC38A3Q99624 504 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 CACFD1Q9UGQ2 172 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 SRPK3Q9UPE1 567 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 DERAQ9Y315 318 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms