RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 PCNX3Q9H6A9 2034 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 FIGNL2A6NMB9 653 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 OIP5O43482 229 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 WDR1O75083 606 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 GABRA1P14867 456 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 CPN1P15169 458 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 ADH6P28332 368 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 PTGER4P35408 488 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 SLC6A8P48029 635 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 GZMMP51124 257 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 KRT72Q14CN4 511 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 PLPPR5Q32ZL2 321 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 RABL3Q5HYI8 236 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 RPS26P11Q5JNZ5 115 aaPredicted RBP11.99□□□□□ -0.49
CKAP2-202ENST00000378034 RAET1LQ5VY80 246 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 MTFR2Q6P444 385 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 ERICH5Q6P6B1 374 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 ARSKQ6UWY0 536 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 CD163Q86VB7 1156 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 CALHM3Q86XJ0 350 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 GRAMD2AQ8IUY3 354 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF440Q8IYI8 595 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 GTPBP8Q8N3Z3 284 aaPredicted RBP11.99□□□□□ -0.49
CKAP2-202ENST00000378034 TMCO5AQ8N6Q1 288 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 BHLHE22Q8NFJ8 381 aaPredicted RBP11.99□□□□□ -0.49
CKAP2-202ENST00000378034 BCAS4Q8TDM0 211 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 SLC35B4Q969S0 331 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 TRIM8Q9BZR9 551 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 PRDM14Q9GZV8 571 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 STOML1Q9UBI4 398 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 TAGLN3Q9UI15 199 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 RPH3AQ9Y2J0 694 aaPredicted RBP11.99□□□□□ -0.49
CKAP2-202ENST00000378034 GPC6Q9Y625 555 aaPredicted RBP11.99□□□□□ -0.49
CKAP2-202ENST00000378034 CLEC18AA5D8T8 446 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 PRORSD1PA6NEY8 169 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 AHRRA9YTQ3 701 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 GMFGO60234 142 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 SERPINB7O75635 380 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 NUDT14O95848 222 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 LINGO3P0C6S8 592 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 PABPC4LP0CB38 370 aaKnown RBP11.99□□□□□ -0.49
CKAP2-202ENST00000378034 UBTFL6P0CB48 400 aaPredicted RBP11.99□□□□□ -0.49
CKAP2-202ENST00000378034 PGCP20142 388 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 PCGF2P35227 344 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 NUDT2P50583 147 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 RNF144AP50876 292 aaPredicted RBP11.99□□□□□ -0.49
CKAP2-202ENST00000378034 PER3P56645 1201 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 EMC4Q5J8M3 183 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF311Q5JNZ3 666 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 MRPL2Q5T653 305 aaKnown RBP11.99□□□□□ -0.49
CKAP2-202ENST00000378034 INTS11Q5TA45 600 aaKnown RBP11.99□□□□□ -0.49
CKAP2-202ENST00000378034 C1QL3Q5VWW1 255 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 C8orf82Q6P1X6 216 aaPredicted RBP11.99□□□□□ -0.49
CKAP2-202ENST00000378034 CLEC18BQ6UXF7 455 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 ZZZ3Q8IYH5 903 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 CLEC18CQ8NCF0 446 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 REXO5Q96IC2 774 aaKnown RBP11.99□□□□□ -0.49
CKAP2-202ENST00000378034 PNPLA3Q9NST1 481 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 TINAGQ9UJW2 476 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 VDAC3Q9Y277 283 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF443Q9Y2A4 671 aaPredicted RBP11.99□□□□□ -0.49
CKAP2-202ENST00000378034 AP4B1Q9Y6B7 739 aa11.99□□□□□ -0.49
CKAP2-202ENST00000378034 OR2M5A3KFT3 312 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 CDHR4A6H8M9 788 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 E9PLN8 166 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 ETV2O00321 342 aaPredicted RBP11.98□□□□□ -0.49
CKAP2-202ENST00000378034 FAAHO00519 579 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 ZNHIT1O43257 154 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 LRRTM2O43300 516 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 CYP7B1O75881 506 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 PEPDP12955 493 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 PRKAR1BP31321 381 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 MNAT1P51948 309 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 EEF1A1P68104 462 aaKnown RBP11.98□□□□□ -0.49
CKAP2-202ENST00000378034 VEZF1Q14119 521 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 VMACQ2NL98 169 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 NDUFAF6Q330K2 333 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 SLC25A53Q5H9E4 307 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF836Q6ZNA1 936 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 HMGN2P46Q86SG4 172 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 VRK2Q86Y07 508 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 FAM26EQ8N5C1 309 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 FITM2Q8N6M3 262 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 PHF10Q8WUB8 498 aaKnown RBP11.98□□□□□ -0.49
CKAP2-202ENST00000378034 TMEM234Q8WY98 164 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 ST8SIA1Q92185 356 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 WDYHV1Q96HA8 205 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 MRGPRX4Q96LA9 322 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF583Q96ND8 569 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 VKORC1Q9BQB6 163 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 EVA1AQ9H8M9 152 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 DNAJB12Q9NXW2 375 aaKnown RBP11.98□□□□□ -0.49
CKAP2-202ENST00000378034 MYO18BQ8IUG5 2567 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 CCL21O00585 134 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 ESRRAP11474 423 aaPredicted RBP11.98□□□□□ -0.49
CKAP2-202ENST00000378034 UQCRBP14927 111 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 ACVR2AP27037 513 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 ELK4P28324 431 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 LHX2P50458 406 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms