RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 HTR3BO95264 441 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 INHAP05111 366 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ABHD14BQ96IU4 210 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF426Q9BUY5 554 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 PCOLCE2Q9UKZ9 415 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM150BA6NC51 233 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 M0R129 80 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 HRGP04196 525 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF133P52736 654 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 OR4D2P58180 307 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF709Q8N972 641 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 STK35Q8TDR2 534 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 MIB2Q96AX9 1013 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 FARSAQ9Y285 508 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 OR1A2Q9Y585 309 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ZFYVE21Q9BQ24 234 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 EDEM2Q9BV94 578 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 FXYD1O00168 92 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 MED6O75586 246 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 AHSA1O95433 338 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 RPS24P62847 133 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 THEM4Q5T1C6 240 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 SEZ6L2Q6UXD5 910 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 HOXB13Q92826 284 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 XRCC3O43542 346 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 APOBEC1P41238 236 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 HTRA4P83105 476 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 VLDLRP98155 873 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 CYP4V2Q6ZWL3 525 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 SGPP2Q8IWX5 399 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 SLC22A24Q8N4F4 322 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 SPRYD4Q8WW59 207 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 SIDT1Q9NXL6 827 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 POMT2Q9UKY4 750 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 DEFB115Q30KQ5 88 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 HPF1Q9NWY4 346 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 CARTPTQ16568 116 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 NADSYN1Q6IA69 706 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 KCNRGQ8N5I3 272 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 PRMT8Q9NR22 394 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 OR4D1Q15615 310 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 CLDN19Q8N6F1 224 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 DTD2Q96FN9 168 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TRMT61BQ9BVS5 477 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ACAD8Q9UKU7 415 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 GLI3P10071 1580 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 A0A1W2PPL8 197 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 TRABD2BA6NFA1 517 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 INHBBP09529 407 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 CSNK2A1P68400 391 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 SLC48A1Q6P1K1 146 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 OR5D16Q8NGK9 328 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 GAS2L1Q99501 681 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 RNF212BA8MTL3 300 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 DFFBO76075 338 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 NGFRP08138 427 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 PPICP45877 212 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 GALNT5Q7Z7M9 940 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF680Q8NEM1 530 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 UPRTQ96BW1 309 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 PDFQ9HBH1 243 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 COQ3Q9NZJ6 369 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 GPR55Q9Y2T6 319 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 HES2Q9Y543 173 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 E9PI62 339 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 UBXN2BQ14CS0 331 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 PPP1R14AQ96A00 147 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 KIR3DX1Q9H7L2 352 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 IL20RAQ9UHF4 553 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 TSTQ16762 297 aaKnown RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 KXD1Q9BQD3 176 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 GKN1Q9NS71 199 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 SLC5A10A0PJK1 596 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 HEPACAM2A8MVW5 462 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 A8MXE2 369 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 DIO1P49895 249 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 GXYLT1Q4G148 440 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ACOT4Q8N9L9 421 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 MFSD9Q8NBP5 474 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 KDM4FA0A1W2PPD8 638 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 FAM149AA5PLN7 773 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 PYCR1P32322 319 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 SLBPQ14493 270 aaKnown RBP eCLIP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 FAAH2Q6GMR7 532 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 SLC16A9Q7RTY1 509 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 DNASE1L2Q92874 299 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ADAP2Q9NPF8 381 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 MS4A4AQ96JQ5 239 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 C11orf16Q9NQ32 467 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 SLC1A3P43003 542 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 GDPD3Q7L5L3 318 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ENTHD1Q8IYW4 607 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 SLC22A8Q8TCC7 542 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 TM9SF4Q92544 642 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 LCN6P62502 163 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 DNAAF1Q8NEP3 725 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 OR52J3Q8NH60 311 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 DVL3Q92997 716 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 TOE1Q96GM8 510 aaKnown RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 HAPLN2Q9GZV7 340 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms