RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 AQP9O43315 295 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 CHP2O43745 196 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 CDRT1O95170 752 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 PAICSP22234 425 aaKnown RBP18.68■□□□□ 0.58
VSX1-202ENST00000376709 CD79BP40259 229 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 IGLV3-21P80748 117 aaPredicted RBP18.68■□□□□ 0.58
VSX1-202ENST00000376709 TPBGQ13641 420 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 TMPRSS11FQ6ZWK6 438 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 Q7L0L9 218 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 GID4Q8IVV7 300 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 SPACA7Q96KW9 195 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 SECISBP2Q96T21 854 aaKnown RBP18.68■□□□□ 0.58
VSX1-202ENST00000376709 SIAEQ9HAT2 523 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 PDE7BQ9NP56 450 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 DNAJB12Q9NXW2 375 aaKnown RBP18.68■□□□□ 0.58
VSX1-202ENST00000376709 ERVK-19Q9WJR5 959 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 YARS2Q9Y2Z4 477 aaKnown RBP18.68■□□□□ 0.58
VSX1-202ENST00000376709 IGHV5-51A0A0C4DH38 117 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 A0A1B0GWA3 101 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 BHLHE40O14503 412 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 SDC3O75056 442 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 IFNA16P05015 189 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 TBXA2RP21731 343 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 ETV6P41212 452 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 RPS25P62851 125 aaKnown RBP18.68■□□□□ 0.58
VSX1-202ENST00000376709 CD300CQ08708 224 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 GARNL3Q5VVW2 1013 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 CCDC190Q86UF4 302 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 GRAMD2AQ8IUY3 354 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 RCBTB1Q8NDN9 531 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 PSD4Q8NDX1 1056 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 CADM4Q8NFZ8 388 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 CDX2Q99626 313 aaPredicted RBP18.68■□□□□ 0.58
VSX1-202ENST00000376709 SLC30A2Q9BRI3 323 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 IFT27Q9BW83 186 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 ENKD1Q9H0I2 346 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 MEPEQ9NQ76 525 aaPredicted RBP18.68■□□□□ 0.58
VSX1-202ENST00000376709 FLRT3Q9NZU0 649 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 TNFRSF10DQ9UBN6 386 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 EXOGQ9Y2C4 368 aaKnown RBP18.68■□□□□ 0.58
VSX1-202ENST00000376709 OR10H1Q9Y4A9 318 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 UGT2A1Q9Y4X1 527 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 PCDHGB6Q9Y5F9 930 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 FAM86C2PA6NEL3 165 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 TLCD2A6NGC4 264 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 HNRNPKP61978 463 aaKnown RBP eCLIP18.67■□□□□ 0.58
VSX1-202ENST00000376709 CRTC2Q53ET0 693 aaPredicted RBP18.67■□□□□ 0.58
VSX1-202ENST00000376709 NPSR1Q6W5P4 371 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 CADM3Q8N126 398 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 KLHL36Q8N4N3 616 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 ZFP41Q8N8Y5 198 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 OR51G2Q8NGK0 314 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 OR51Q1Q8NH59 317 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 SHDQ96IW2 340 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 KCTD7Q96MP8 289 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 TM9SF2Q99805 663 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 G6PC3Q9BUM1 346 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 TRIM2Q9C040 744 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.67■□□□□ 0.58
VSX1-202ENST00000376709 WNT16Q9UBV4 365 aa18.67■□□□□ 0.58
VSX1-202ENST00000376709 CAB39Q9Y376 341 aaPredicted RBP18.67■□□□□ 0.58
VSX1-202ENST00000376709 TRAV27A0A087WT01 109 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 ZNF749O43361 778 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 IGHA1P01876 353 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 GABRA5P31644 462 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 GPR3P46089 330 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 GABRA4P48169 554 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 ALG10BQ5I7T1 473 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 TCTE1Q5JU00 501 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 LNX2Q8N448 690 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 POC5Q8NA72 575 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 C16orf52Q8NHV5 167 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 ZNF285Q96NJ3 590 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 MED20Q9H944 212 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 ERVK13-1Q9NX77 482 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 SIGLEC7Q9Y286 467 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 LOC110117498-PIK3R3F6TDL0 507 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 ADAM11O75078 769 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 IL1AP01583 271 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 GUSBP08236 651 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 TNFSF8P32971 234 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 ACAA2P42765 397 aaKnown RBP18.66■□□□□ 0.58
VSX1-202ENST00000376709 FNTBP49356 437 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 CTBP2P56545 445 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 HSD17B7P56937 341 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 ZNF791Q3KP31 576 aaPredicted RBP18.66■□□□□ 0.58
VSX1-202ENST00000376709 NKAIN2Q5VXU1 208 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 NIPAL3Q6P499 406 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 B3GLCTQ6Y288 498 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 THSD4Q6ZMP0 1018 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 GATAD2AQ86YP4 633 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 CADM2Q8N3J6 435 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 SIRT6Q8N6T7 355 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 ZNF485Q8NCK3 441 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 OR51A7Q8NH64 312 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 HTRA1Q92743 480 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 SLC25A46Q96AG3 418 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 OR10A5Q9H207 317 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 CHRDQ9H2X0 955 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 FN3KQ9H479 309 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms