RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 CLDN20P56880 219 aa11.77□□□□□ -0.53
CLCN6-205ENST00000376492 HSPB3Q12988 150 aa11.77□□□□□ -0.53
CLCN6-205ENST00000376492 VEZF1Q14119 521 aa11.77□□□□□ -0.53
CLCN6-205ENST00000376492 PON3Q15166 354 aa11.77□□□□□ -0.53
CLCN6-205ENST00000376492 CYP27C1Q4G0S4 372 aa11.77□□□□□ -0.53
CLCN6-205ENST00000376492 BEX5Q5H9J7 111 aa11.77□□□□□ -0.53
CLCN6-205ENST00000376492 HEPHL1Q6MZM0 1159 aa11.77□□□□□ -0.53
CLCN6-205ENST00000376492 SLC44A2Q8IWA5 706 aaPredicted RBP11.77□□□□□ -0.53
CLCN6-205ENST00000376492 PSMA8Q8TAA3 256 aa11.77□□□□□ -0.53
CLCN6-205ENST00000376492 RNF138Q8WVD3 245 aa11.77□□□□□ -0.53
CLCN6-205ENST00000376492 EFHD2Q96C19 240 aaPredicted RBP11.77□□□□□ -0.53
CLCN6-205ENST00000376492 LRRC37BQ96QE4 947 aa11.77□□□□□ -0.53
CLCN6-205ENST00000376492 LMF2Q9BU23 707 aaKnown RBP11.77□□□□□ -0.53
CLCN6-205ENST00000376492 TMEM120AQ9BXJ8 343 aa11.77□□□□□ -0.53
CLCN6-205ENST00000376492 BHLHE41Q9C0J9 482 aaPredicted RBP11.77□□□□□ -0.53
CLCN6-205ENST00000376492 TCF7L2Q9NQB0 619 aa11.77□□□□□ -0.53
CLCN6-205ENST00000376492 MRPS18CQ9Y3D5 142 aaKnown RBP11.77□□□□□ -0.53
CLCN6-205ENST00000376492 CHD3Q12873 2000 aaKnown RBP11.76□□□□□ -0.53
CLCN6-205ENST00000376492 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 A0A1W2PRB8 838 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 H3BML4 177 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 SDHDO14521 159 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 HS3ST1O14792 307 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 ANKRD28O15084 1053 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 SCO2O43819 266 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 TNFRSF21O75509 655 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 AQP8O94778 261 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 HK1P19367 917 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 IL12BP29460 328 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 MAP3K8P41279 467 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 ATP4BP51164 291 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 PNLIPRP2P54317 469 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 DSCR4P56555 118 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-205ENST00000376492 ZNF155Q12901 538 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-205ENST00000376492 STX5Q13190 355 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 CLEC12BQ2HXU8 276 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 SPATA19Q7Z5L4 167 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 FADS6Q8N9I5 356 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 OR2M3Q8NG83 312 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 OR4N2Q8NGD1 307 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 RFWD2Q8NHY2 731 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 OR5P2Q8WZ92 322 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 GIMAP5Q96F15 307 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 PLPPR2Q96GM1 343 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 DSN1Q9H410 356 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 RABEP2Q9H5N1 569 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 C3orf14Q9HBI5 128 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 SIRT3Q9NTG7 399 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-205ENST00000376492 FLRT3Q9NZU0 649 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 DCTN4Q9UJW0 460 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 ZNF337Q9Y3M9 751 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 ZNF175Q9Y473 711 aa11.76□□□□□ -0.53
CLCN6-205ENST00000376492 HNRNPCL1O60812 293 aaKnown RBP11.75□□□□□ -0.53
CLCN6-205ENST00000376492 ATP5HO75947 161 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 KITP10721 976 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 EVI2BP34910 448 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 SLC6A8P48029 635 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 EFR3AQ14156 821 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 ZNHIT3Q15649 155 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-205ENST00000376492 GSTA3Q16772 222 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 LSM12Q3MHD2 195 aaKnown RBP11.75□□□□□ -0.53
CLCN6-205ENST00000376492 ZCCHC12Q6PEW1 402 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 STAC2Q6ZMT1 411 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 FAM214BQ7L5A3 538 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 TRPM8Q7Z2W7 1104 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 MAVSQ7Z434 540 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 WFDC8Q8IUA0 241 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 ZNF611Q8N823 705 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 CDRT4Q8N9R6 151 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 NUP43Q8NFH3 380 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 OR8J2Q8NGG1 315 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 AKAP1Q92667 903 aaKnown RBP eCLIP11.75□□□□□ -0.53
CLCN6-205ENST00000376492 TMEM204Q9BSN7 226 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 DUSP26Q9BV47 211 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 RTN4RQ9BZR6 473 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 DPY30Q9C005 99 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 MYLK2Q9H1R3 596 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 SAR1AQ9NR31 198 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 MED11Q9P086 117 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 PPP4R1LQ9P1A2 415 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 MARCOQ9UEW3 520 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-205ENST00000376492 CLEC4AQ9UMR7 237 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 LAMP3Q9UQV4 416 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 OR10H1Q9Y4A9 318 aa11.75□□□□□ -0.53
CLCN6-205ENST00000376492 OR2M5A3KFT3 312 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 CCT8L1PA6NM43 557 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 SHISA8B8ZZ34 492 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 NKX2-2O95096 273 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 ALDOCP09972 364 aaKnown RBP11.74□□□□□ -0.53
CLCN6-205ENST00000376492 EFNA1P20827 205 aaPredicted RBP11.74□□□□□ -0.53
CLCN6-205ENST00000376492 EPHA3P29320 983 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 GABRA3P34903 492 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 KRT20P35900 424 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 PRKAG1P54619 331 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 RPS4XP62701 263 aaKnown RBP11.74□□□□□ -0.53
CLCN6-205ENST00000376492 MRPS22P82650 360 aaKnown RBP11.74□□□□□ -0.53
CLCN6-205ENST00000376492 PRR5P85299 388 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 FGFBP1Q14512 234 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 KRT72Q14CN4 511 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 DECR1Q16698 335 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms