RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 EIF4EP06730 217 aaKnown RBP13.5□□□□□ -0.25
MSH5-201ENST00000375703 NPIPA8P0DM63 369 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 SMIM10L1P0DMW3 83 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 AK4P27144 223 aaPredicted RBP13.5□□□□□ -0.25
MSH5-201ENST00000375703 RFX3P48380 749 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 AGFG1P52594 562 aaKnown RBP13.5□□□□□ -0.25
MSH5-201ENST00000375703 ATP12AP54707 1039 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 SLC3A1Q07837 685 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 TNK1Q13470 666 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 ENPP2Q13822 863 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 SMUG1Q53HV7 270 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 DCST2Q5T1A1 773 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 THSD4Q6ZMP0 1018 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 CEACAM19Q7Z692 300 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 YAF2Q8IY57 180 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 ABHD4Q8TB40 342 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 DEDD2Q8WXF8 326 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 KISS1RQ969F8 398 aaPredicted RBP13.5□□□□□ -0.25
MSH5-201ENST00000375703 KCTD12Q96CX2 325 aaKnown RBP13.5□□□□□ -0.25
MSH5-201ENST00000375703 BPIFA2Q96DR5 249 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 SMIM10Q96HG1 83 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 SLC28A3Q9HAS3 691 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 CMC2Q9NRP2 79 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 C19orf53Q9UNZ5 99 aaPredicted RBP13.5□□□□□ -0.25
MSH5-201ENST00000375703 RASD1Q9Y272 281 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 SNRNP200O75643 2136 aaKnown RBP13.49□□□□□ -0.25
MSH5-201ENST00000375703 PRSS38A1L453 326 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 SYNDIG1LA6NDD5 238 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 J3QLW9 94 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 PEX12O00623 359 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 PLPP2O43688 288 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 MRPL3P09001 348 aaKnown RBP13.49□□□□□ -0.25
MSH5-201ENST00000375703 SAGP10523 405 aaPredicted RBP13.49□□□□□ -0.25
MSH5-201ENST00000375703 NID1P14543 1247 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 ZNF19P17023 458 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
MSH5-201ENST00000375703 PITPNBP48739 271 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 SEC13P55735 322 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 MRPL28Q13084 256 aaKnown RBP13.49□□□□□ -0.25
MSH5-201ENST00000375703 MAB21L1Q13394 359 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 FCRLBQ6BAA4 426 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 RD3Q7Z3Z2 195 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 AKAP1Q92667 903 aaKnown RBP eCLIP13.49□□□□□ -0.25
MSH5-201ENST00000375703 RFT1Q96AA3 541 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 SLC22A18Q96BI1 424 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 TM4SF19Q96DZ7 209 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 SCARF2Q96GP6 870 aaPredicted RBP13.49□□□□□ -0.25
MSH5-201ENST00000375703 NECTIN4Q96NY8 510 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 OR2M4Q96R27 311 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 PLA2G2FQ9BZM2 168 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 MKRN2Q9H000 416 aaKnown RBP13.49□□□□□ -0.25
MSH5-201ENST00000375703 TRPV4Q9HBA0 871 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 INPP5EQ9NRR6 644 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 KCNE5Q9UJ90 142 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 ZNF780AO75290 641 aaPredicted RBP13.49□□□□□ -0.25
MSH5-201ENST00000375703 NDUFS1P28331 727 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 SLC6A1P30531 599 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 ACSL1P33121 698 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 BMP8BP34820 402 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 OR10A3P58181 314 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 E2F1Q01094 437 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 BICRALQ6AI39 1079 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 RPL13AP3Q6NVV1 102 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 TMPRSS11FQ6ZWK6 438 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 BMP8AQ7Z5Y6 402 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 OAFQ86UD1 273 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 GPALPP1Q8IXQ4 340 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 OR13C2Q8NGS9 318 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 OR2A5Q96R48 311 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 SLC6A17Q9H1V8 727 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 TMEM74BQ9NUR3 256 aa13.49□□□□□ -0.25
MSH5-201ENST00000375703 ZNF624Q9P2J8 865 aaPredicted RBP13.49□□□□□ -0.25
MSH5-201ENST00000375703 CDHR4A6H8M9 788 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 URADA6NGE7 173 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 LRRC72A6NJI9 287 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 SMLR1H3BR10 107 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 P2RX6O15547 441 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 AKR7A2O43488 359 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 PLRG1O43660 514 aaKnown RBP13.48□□□□□ -0.25
MSH5-201ENST00000375703 LYPD3O95274 346 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 CD53P19397 219 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 RPS4Y1P22090 263 aaKnown RBP13.48□□□□□ -0.25
MSH5-201ENST00000375703 THBS2P35442 1172 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 GNG2P59768 71 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 TRAM1Q15629 374 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 SFXN4Q6P4A7 337 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 FIGNL1Q6PIW4 674 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 TPRA1Q86W33 373 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 TMEFF1Q8IYR6 380 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 GPR135Q8IZ08 494 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 CADM2Q8N3J6 435 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 DNAJC5GQ8N7S2 189 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 COX18Q8N8Q8 333 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 OR51A7Q8NH64 312 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 OR4C6Q8NH72 309 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 C4orf36Q96KX1 117 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 GTPBP2Q9BX10 602 aaKnown RBP13.48□□□□□ -0.25
MSH5-201ENST00000375703 ABCG5Q9H222 651 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 FOLH1BQ9HBA9 442 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 SIGLEC7Q9Y286 467 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms