RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 TMEM64Q6YI46 380 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 TMEM99Q8N816 258 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 OR5M3Q8NGP4 307 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 ZNF563Q8TA94 476 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 TSEN15Q8WW01 171 aaKnown RBP12.26□□□□□ -0.45
CUL4A-203ENST00000375441 ATP13A2Q9NQ11 1180 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 HCN3Q9P1Z3 774 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 MGAT4CQ9UBM8 478 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 PRELID1Q9Y255 219 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 MRPS33Q9Y291 106 aaKnown RBP12.26□□□□□ -0.45
CUL4A-203ENST00000375441 CCDC85CA6NKD9 419 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 LDB3O75112 727 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 HNRNPA1P09651 372 aaKnown RBP eCLIP12.26□□□□□ -0.45
CUL4A-203ENST00000375441 ITPKBP27987 946 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 CLDN20P56880 219 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 SKP1P63208 163 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 ILF3Q12906 894 aaKnown RBP eCLIP12.26□□□□□ -0.45
CUL4A-203ENST00000375441 SNTA1Q13424 505 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 ALG10BQ5I7T1 473 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 ZNF620Q6ZNG0 422 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 SDR9C7Q8NEX9 313 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 OR8K3Q8NH51 312 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 THAP4Q8WY91 577 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 GHSRQ92847 366 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 MS4A6EQ96DS6 147 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 HHIPQ96QV1 700 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 ACTR6Q9GZN1 396 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 NDOR1Q9UHB4 597 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 PLEKHM1Q9Y4G2 1056 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 HCFC2Q9Y5Z7 792 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 RBMS1P29558 406 aaKnown RBP12.26□□□□□ -0.45
CUL4A-203ENST00000375441 PRKAR1BP31321 381 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 FGF9P31371 208 aaPredicted RBP12.26□□□□□ -0.45
CUL4A-203ENST00000375441 PSMB10P40306 273 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 LIMS1P48059 325 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 PCBP4P57723 403 aaKnown RBP12.26□□□□□ -0.45
CUL4A-203ENST00000375441 FBXW4P57775 412 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 MRPL2Q5T653 305 aaKnown RBP12.26□□□□□ -0.45
CUL4A-203ENST00000375441 SLC22A10Q63ZE4 541 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 HDDC2Q7Z4H3 204 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 FCAMRQ8WWV6 532 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 KCTD12Q96CX2 325 aaKnown RBP12.26□□□□□ -0.45
CUL4A-203ENST00000375441 CCDC120Q96HB5 630 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 OR2M4Q96R27 311 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 WFDC6Q9BQY6 131 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 WASH6PQ9NQA3 447 aa12.26□□□□□ -0.45
CUL4A-203ENST00000375441 LSM2Q9Y333 95 aaKnown RBP12.26□□□□□ -0.45
CUL4A-203ENST00000375441 FXYD6-FXYD2A0A087WZ82 144 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 GXYLT2A0PJZ3 443 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 NTN1O95631 604 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 TCRBP04435 133 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 MSL3P1P0C860 447 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 ARL4DP49703 201 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 GDI2P50395 445 aaKnown RBP12.25□□□□□ -0.45
CUL4A-203ENST00000375441 MAZP56270 477 aaKnown RBP12.25□□□□□ -0.45
CUL4A-203ENST00000375441 VSX2P58304 361 aaPredicted RBP12.25□□□□□ -0.45
CUL4A-203ENST00000375441 RPS15AP62244 130 aaKnown RBP12.25□□□□□ -0.45
CUL4A-203ENST00000375441 CRMP1Q14194 572 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 IRF4Q15306 451 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 WDR45BQ5MNZ6 344 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 ZNF776Q68DI1 518 aaPredicted RBP12.25□□□□□ -0.45
CUL4A-203ENST00000375441 ZNF613Q6PF04 617 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 RPTNQ6XPR3 784 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 OR8D4Q8NGM9 314 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 GPA33Q99795 319 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 PDCD10Q9BUL8 212 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 FXYD6Q9H0Q3 95 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 C14orf105Q9NVL8 296 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 FAM171A2A8MVW0 826 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 SURF4O15260 269 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 CCR6P51684 374 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 RPS21P63220 83 aaKnown RBP12.25□□□□□ -0.45
CUL4A-203ENST00000375441 GPLD1P80108 840 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 DPTQ07507 201 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 GLYR1Q49A26 553 aaPredicted RBP12.25□□□□□ -0.45
CUL4A-203ENST00000375441 TMEM69Q5SWH9 247 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 ARHGAP11AQ6P4F7 1023 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 FAM111BQ6SJ93 734 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 C12orf40Q86WS4 652 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 TMEFF1Q8IYR6 380 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 TCTE3Q8IZS6 198 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 OR2L3Q8NG85 312 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 OR4Q3Q8NH05 313 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 NXPE2Q96DL1 559 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 LINC00615Q96LM1 132 aaPredicted RBP12.25□□□□□ -0.45
CUL4A-203ENST00000375441 CNN2Q99439 309 aaKnown RBP12.25□□□□□ -0.45
CUL4A-203ENST00000375441 OR6C2Q9NZP2 312 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 GPR55Q9Y2T6 319 aaPredicted RBP12.25□□□□□ -0.45
CUL4A-203ENST00000375441 CXorf51AA0A1B0GTR3 108 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 ELOA3DA6NLF2 546 aaPredicted RBP12.25□□□□□ -0.45
CUL4A-203ENST00000375441 OR10A3P58181 314 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 SHC2P98077 582 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 ENPP2Q13822 863 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 ELOA3BQ3SY89 546 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 ZNF628Q5EBL2 1059 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 COMMD7Q86VX2 200 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 TPRA1Q86W33 373 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 KIF18BQ86Y91 864 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 SIAH3Q8IW03 269 aa12.25□□□□□ -0.45
CUL4A-203ENST00000375441 ZNF619Q8N2I2 560 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms