RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SLC35E2P0CK97 266 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 ACP2P11117 423 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 TYRP1P17643 537 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 CDK5Q00535 292 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 DUSP5Q16690 384 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 SYT16Q17RD7 645 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 TMEM44Q2T9K0 475 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 ARMCX4Q5H9R4 360 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 EXOSC6Q5RKV6 272 aaKnown RBP7.64□□□□□ -1.19
UBR4-202ENST00000375224 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.64□□□□□ -1.19
UBR4-202ENST00000375224 RASSF6Q6ZTQ3 369 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 RAB43Q86YS6 212 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 LYSMD2Q8IV50 215 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 MCATQ8IVS2 390 aaKnown RBP7.64□□□□□ -1.19
UBR4-202ENST00000375224 OR8H3Q8N146 312 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 CYP4Z2PQ8N1L4 340 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 COX18Q8N8Q8 333 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 KBTBD8Q8NFY9 601 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 CADM4Q8NFZ8 388 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 DYNC2LI1Q8TCX1 351 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 SGTBQ96EQ0 304 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 TCTN2Q96GX1 697 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 ORAI3Q9BRQ5 295 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 ZNF350Q9GZX5 532 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 SAP130Q9H0E3 1048 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 QRSL1Q9H0R6 528 aaKnown RBP7.64□□□□□ -1.19
UBR4-202ENST00000375224 MIR1-1HGQ9H1L0 117 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 CHRDQ9H2X0 955 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 ANKRA2Q9H9E1 313 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 ADAP2Q9NPF8 381 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 TVP23BQ9NYZ1 205 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 NLGN3Q9NZ94 848 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 MKLN1Q9UL63 735 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 BAIAP2Q9UQB8 552 aa7.64□□□□□ -1.19
UBR4-202ENST00000375224 MRPS2Q9Y399 296 aaKnown RBP7.64□□□□□ -1.19
UBR4-202ENST00000375224 LILRA5A6NI73 299 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 AGAP5A6NIR3 686 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 CPSF4LA6NMK7 179 aaKnown RBP7.63□□□□□ -1.19
UBR4-202ENST00000375224 METTL12A8MUP2 240 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 FGF17O60258 216 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 NDUFS6O75380 124 aaKnown RBP7.63□□□□□ -1.19
UBR4-202ENST00000375224 NME1P15531 152 aaKnown RBP7.63□□□□□ -1.19
UBR4-202ENST00000375224 LIPAP38571 399 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 HTR3AP46098 478 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 AVPR1BP47901 424 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 SGCAQ16586 387 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 PRICKLE4Q2TBC4 344 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 KLHL22Q53GT1 634 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 TRMT12Q53H54 448 aaKnown RBP7.63□□□□□ -1.19
UBR4-202ENST00000375224 DCST2Q5T1A1 773 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 SLC27A4Q6P1M0 643 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 PLCZ1Q86YW0 608 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 TCEANCQ8N8B7 351 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 OSTF1Q92882 214 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 RIT1Q92963 219 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 SHDQ96IW2 340 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 TINAGL1Q9GZM7 467 aaPredicted RBP7.63□□□□□ -1.19
UBR4-202ENST00000375224 CBY1Q9Y3M2 126 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 C5orf42Q9H799 3197 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 CDH23Q9H251 3354 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 M0R129 80 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 OR10H2O60403 315 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 FCMRO60667 390 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 LDB3O75112 727 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 GUSBP08236 651 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 RNH1P13489 461 aaKnown RBP7.63□□□□□ -1.19
UBR4-202ENST00000375224 ST6GAL1P15907 406 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 LSM3P62310 102 aaKnown RBP7.63□□□□□ -1.19
UBR4-202ENST00000375224 EEF1A1P68104 462 aaKnown RBP7.63□□□□□ -1.19
UBR4-202ENST00000375224 ZNHIT3Q15649 155 aaPredicted RBP7.63□□□□□ -1.19
UBR4-202ENST00000375224 ZSWIM7Q19AV6 140 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 EEF1A1P5Q5VTE0 462 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 WDR36Q8NI36 951 aaKnown RBP7.63□□□□□ -1.19
UBR4-202ENST00000375224 NDNFQ8TB73 568 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 ZG16BQ96DA0 208 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 SLC41A3Q96GZ6 507 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 NELL2Q99435 816 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 MND1Q9BWT6 205 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 TSSK6Q9BXA6 273 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 DCSTAMPQ9H295 470 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 TTYH1Q9H313 450 aaPredicted RBP7.63□□□□□ -1.19
UBR4-202ENST00000375224 SEMA4GQ9NTN9 838 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 EIF3KQ9UBQ5 218 aaKnown RBP7.63□□□□□ -1.19
UBR4-202ENST00000375224 COPS3Q9UNS2 423 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 A3GALT2U3KPV4 340 aa7.63□□□□□ -1.19
UBR4-202ENST00000375224 FMO6PO60774 539 aa7.62□□□□□ -1.19
UBR4-202ENST00000375224 OR2B3O76000 313 aa7.62□□□□□ -1.19
UBR4-202ENST00000375224 PTHP01270 115 aa7.62□□□□□ -1.19
UBR4-202ENST00000375224 FPR3P25089 353 aa7.62□□□□□ -1.19
UBR4-202ENST00000375224 HOXA1P49639 335 aaPredicted RBP7.62□□□□□ -1.19
UBR4-202ENST00000375224 STARP49675 285 aa7.62□□□□□ -1.19
UBR4-202ENST00000375224 RGS6P49758 472 aa7.62□□□□□ -1.19
UBR4-202ENST00000375224 NCS1P62166 190 aa7.62□□□□□ -1.19
UBR4-202ENST00000375224 FLI1Q01543 452 aaPredicted RBP7.62□□□□□ -1.19
UBR4-202ENST00000375224 ID2Q02363 134 aa7.62□□□□□ -1.19
UBR4-202ENST00000375224 MAP4K2Q12851 820 aa7.62□□□□□ -1.19
UBR4-202ENST00000375224 C1DQ13901 141 aaKnown RBP7.62□□□□□ -1.19
UBR4-202ENST00000375224 GRM7Q14831 915 aa7.62□□□□□ -1.19
UBR4-202ENST00000375224 MFSD13AQ14CX5 517 aa7.62□□□□□ -1.19
UBR4-202ENST00000375224 SNAPC1Q16533 368 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms