RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 SAP18O00422 153 aaKnown RBP4.45□□□□□ -1.7
USP48-202ENST00000374730 PLK4O00444 970 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 NDUFS4O43181 175 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 PRAMEF2O60811 474 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 PDE9AO76083 593 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 KAT7O95251 611 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 GBAP04062 536 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 IFNW1P05000 195 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 PCCBP05166 539 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 SLC35G4P0C7Q5 338 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 GABRB1P18505 474 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 EPHA2P29317 976 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 AQP1P29972 269 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 PKLRP30613 574 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 HOXD12P35452 270 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 SOAT1P35610 550 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 TRIM23P36406 574 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 TGFBR2P37173 567 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 RAB28P51157 221 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 BMXP51813 675 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 MAPK12P53778 367 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 CDH12P55289 794 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 C21orf59P57076 290 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 TAS2R38P59533 333 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 IL1RL1Q01638 556 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 SPIBQ01892 262 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 DNASE1L3Q13609 305 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 TSTA3Q13630 321 aaPredicted RBP4.45□□□□□ -1.7
USP48-202ENST00000374730 RUNX3Q13761 415 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 ZNF846Q147U1 533 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 HEPACAMQ14CZ8 416 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 SPCS2Q15005 226 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 RAB30Q15771 203 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 CST6Q15828 149 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 SLC5A12Q1EHB4 618 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 MICAQ29983 383 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 EXOC3L2Q2M3D2 409 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 WSCD2Q2TBF2 565 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 KIAA1161Q6NSJ0 714 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 REEP3Q6NUK4 255 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 ANGPTL8Q6UXH0 198 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 VITQ6UXI7 678 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 TMEM64Q6YI46 380 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 GET4Q7L5D6 327 aaPredicted RBP4.45□□□□□ -1.7
USP48-202ENST00000374730 P2RY8Q86VZ1 359 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 RNF130Q86XS8 419 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 ADGRF3Q8IZF5 1079 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 DNAJC22Q8N4W6 341 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 SLC5A8Q8N695 610 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 SMYD1Q8NB12 490 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 DENND6BQ8NEG7 585 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 TTLQ8NG68 377 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 OR2L8Q8NGY9 312 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 RHOXF1Q8NHV9 184 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 C9orf43Q8TAL5 461 aaPredicted RBP4.45□□□□□ -1.7
USP48-202ENST00000374730 MPLKIPQ8TAP9 179 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 MIPOL1Q8TD10 442 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 ADAMTS15Q8TE58 950 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 PHF10Q8WUB8 498 aaKnown RBP4.45□□□□□ -1.7
USP48-202ENST00000374730 APOBEC4Q8WW27 367 aaKnown RBP4.45□□□□□ -1.7
USP48-202ENST00000374730 S100ZQ8WXG8 99 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 DNASE1L2Q92874 299 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 TM4SF18Q96CE8 201 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 VMP1Q96GC9 406 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 PLEKHA8Q96JA3 519 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 IL17FQ96PD4 163 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 FEVQ99581 238 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 PIP5K1AQ99755 562 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 MAPKAP1Q9BPZ7 522 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 CHCHD6Q9BRQ6 235 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 CCDC90BQ9GZT6 254 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 DDX31Q9H8H2 851 aaKnown RBP4.45□□□□□ -1.7
USP48-202ENST00000374730 PREBQ9HCU5 417 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 LHX9Q9NQ69 397 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 HEYLQ9NQ87 328 aaPredicted RBP4.45□□□□□ -1.7
USP48-202ENST00000374730 FBXO8Q9NRD0 319 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 PHPT1Q9NRX4 125 aaPredicted RBP4.45□□□□□ -1.7
USP48-202ENST00000374730 SIRT3Q9NTG7 399 aaPredicted RBP4.45□□□□□ -1.7
USP48-202ENST00000374730 ACSS1Q9NUB1 689 aaPredicted RBP4.45□□□□□ -1.7
USP48-202ENST00000374730 ACER3Q9NUN7 267 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 TMEM184CQ9NVA4 438 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 FAIMQ9NVQ4 179 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 TAS2R7Q9NYW3 318 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 SLC23A2Q9UGH3 650 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 TAC3Q9UHF0 121 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 PSORS1C1Q9UIG5 152 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 PLAGL1Q9UM63 463 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 RNF6Q9Y252 685 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 COL4A2P08572 1712 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 DSPPQ9NZW4 1301 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 LAMA3Q16787 3333 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 A0A0A6YYD5 115 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 IGLON5A6NGN9 336 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 B9A039 149 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 C5orf58C9J3I9 102 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 CLDN25C9JDP6 229 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 MID1O15344 667 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 MPZL2O60487 215 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 CBFA2T3O75081 653 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 CCNB2O95067 398 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms