RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 TGIF2LYQ8IUE0 185 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 C10orf67Q8IYJ2 551 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 EID3Q8N140 333 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 ARMC10Q8N2F6 343 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 GHDCQ8N2G8 530 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 SLC5A8Q8N695 610 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 SLC22A8Q8TCC7 542 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 SLC26A7Q8TE54 656 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 PHF10Q8WUB8 498 aaKnown RBP7.05□□□□□ -1.28
SP140-202ENST00000373645 WDR60Q8WVS4 1066 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 FAM162AQ96A26 154 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 NSMCE2Q96MF7 247 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 SPATA5L1Q9BVQ7 753 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 TRIM15Q9C019 465 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 ZNF350Q9GZX5 532 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 SLC38A1Q9H2H9 487 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 CDCP1Q9H5V8 836 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 DLL4Q9NR61 685 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 CCM2LQ9NUG4 571 aaPredicted RBP7.05□□□□□ -1.28
SP140-202ENST00000373645 TEKT2Q9UIF3 430 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 MKLN1Q9UL63 735 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 YARS2Q9Y2Z4 477 aaKnown RBP7.05□□□□□ -1.28
SP140-202ENST00000373645 IFT52Q9Y366 437 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 WDR45Q9Y484 360 aa7.05□□□□□ -1.28
SP140-202ENST00000373645 FLNAP21333 2647 aaKnown RBP7.05□□□□□ -1.28
SP140-202ENST00000373645 NIPBLQ6KC79 2804 aaeCLIP7.05□□□□□ -1.28
SP140-202ENST00000373645 JMJD1CQ15652 2540 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 DSPPQ9NZW4 1301 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 FBN3Q75N90 2809 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 A0A1B0GTH9 108 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 AQP12BA6NM10 295 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 NME2P1O60361 137 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 TSPAN2O60636 221 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 ITGA10O75578 1167 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 SLC25A12O75746 678 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 OR2J2O76002 312 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 MFN2O95140 757 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 IGKV1D-16P01601 117 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 TPOP07202 933 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 NME2P22392 152 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 ABCD3P28288 659 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 MSX1P28360 303 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 IL12BP29460 328 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 AQP1P29972 269 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 RFX3P48380 749 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 TMED10P49755 219 aaKnown RBP7.04□□□□□ -1.28
SP140-202ENST00000373645 ATP12AP54707 1039 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 MLF1P58340 268 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 ACTR3P61158 418 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 CHRNEQ04844 493 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 PLCXD2Q0VAA5 305 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 KPNB1Q14974 876 aaKnown RBP7.04□□□□□ -1.28
SP140-202ENST00000373645 GPR68Q15743 365 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 MEP1AQ16819 746 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 FLYWCH1Q4VC44 716 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 EMC4Q5J8M3 183 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 RPS26P11Q5JNZ5 115 aaPredicted RBP7.04□□□□□ -1.28
SP140-202ENST00000373645 TYW3Q6IPR3 259 aaKnown RBP7.04□□□□□ -1.28
SP140-202ENST00000373645 OPN5Q6U736 354 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 CYP2R1Q6VVX0 501 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 FRRS1Q6ZNA5 592 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 CBLL1Q75N03 491 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 EIF3MQ7L2H7 374 aaKnown RBP7.04□□□□□ -1.28
SP140-202ENST00000373645 NUP54Q7Z3B4 507 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 AQP12AQ8IXF9 295 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 DMRTC2Q8IXT2 367 aaPredicted RBP7.04□□□□□ -1.28
SP140-202ENST00000373645 PEX5LQ8IYB4 626 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 ZNF619Q8N2I2 560 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 GOLM1Q8NBJ4 401 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 BHLHE22Q8NFJ8 381 aaPredicted RBP7.04□□□□□ -1.28
SP140-202ENST00000373645 SPPL2AQ8TCT8 520 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 RASSF5Q8WWW0 418 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 DIO2Q92813 273 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 TMBIM1Q969X1 311 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 OMA1Q96E52 524 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 ZNF354BQ96LW1 612 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 RNF145Q96MT1 663 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 COL21A1Q96P44 957 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 SMR3AQ99954 134 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 UTP23Q9BRU9 249 aaKnown RBP7.04□□□□□ -1.28
SP140-202ENST00000373645 HOXD1Q9GZZ0 328 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 CXXC4Q9H2H0 198 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 DENND2DQ9H6A0 471 aaPredicted RBP7.04□□□□□ -1.28
SP140-202ENST00000373645 TRIM45Q9H8W5 580 aaPredicted RBP7.04□□□□□ -1.28
SP140-202ENST00000373645 DCAF13Q9NV06 445 aaKnown RBP7.04□□□□□ -1.28
SP140-202ENST00000373645 FBXO34Q9NWN3 711 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 ADPRHL2Q9NX46 363 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 RPS6KA6Q9UK32 745 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 ZNF232Q9UNY5 417 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 RNF6Q9Y252 685 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 GPC6Q9Y625 555 aaPredicted RBP7.04□□□□□ -1.28
SP140-202ENST00000373645 CSPG4Q6UVK1 2322 aa7.04□□□□□ -1.28
SP140-202ENST00000373645 TCRBV5S2A0A599 114 aa7.03□□□□□ -1.28
SP140-202ENST00000373645 TCRBV3S1A0A5B6 114 aa7.03□□□□□ -1.28
SP140-202ENST00000373645 OR6C70A6NIJ9 312 aa7.03□□□□□ -1.28
SP140-202ENST00000373645 AGAP5A6NIR3 686 aa7.03□□□□□ -1.28
SP140-202ENST00000373645 H0YHG0 523 aa7.03□□□□□ -1.28
SP140-202ENST00000373645 CDK2AP1O14519 115 aa7.03□□□□□ -1.28
SP140-202ENST00000373645 PRRG2O14669 202 aa7.03□□□□□ -1.28
SP140-202ENST00000373645 HS6ST1O60243 411 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms