RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 C18orf63Q68DL7 685 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 NLRC3Q7RTR2 1065 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 IRF7Q92985 503 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 SLC41A3Q96GZ6 507 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 C4orf36Q96KX1 117 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 MRGPRX3Q96LB0 322 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 DDOQ99489 341 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 USB1Q9BQ65 265 aaKnown RBP12.74□□□□□ -0.37
USP49-201ENST00000373006 AICDAQ9GZX7 198 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 TMEM168Q9H0V1 697 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 OR52A5Q9H2C5 316 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 PPA2Q9H2U2 334 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 SYNDIG1Q9H7V2 258 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 HCN3Q9P1Z3 774 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 ATG4BQ9Y4P1 393 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.74□□□□□ -0.37
USP49-201ENST00000373006 MAN2B1O00754 1011 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 PPM1BO75688 479 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 GYPBP06028 91 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 LCN1P31025 176 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 MC3RP41968 323 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 DEFA5Q01523 94 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 Q6ZTK2 550 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 GPALPP1Q8IXQ4 340 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 SRFBP1Q8NEF9 429 aaKnown RBP12.74□□□□□ -0.37
USP49-201ENST00000373006 OR6M1Q8NGM8 313 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 HGDQ93099 445 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 ZNF436Q9C0F3 470 aaPredicted RBP12.74□□□□□ -0.37
USP49-201ENST00000373006 HMX1Q9NP08 348 aaPredicted RBP12.74□□□□□ -0.37
USP49-201ENST00000373006 SCP2D1Q9UJQ7 156 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 FBXL4Q9UKA2 621 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 GON4LQ3T8J9 2241 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 G3V3Q6 166 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 ZIC2O95409 532 aaPredicted RBP12.73□□□□□ -0.37
USP49-201ENST00000373006 GLAP06280 429 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 DRD2P14416 443 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 ATF1P18846 271 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 PYCR1P32322 319 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 NUP62P37198 522 aaPredicted RBP12.73□□□□□ -0.37
USP49-201ENST00000373006 BLVRAP53004 296 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 HCCSP53701 268 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 MEPCEQ7L2J0 689 aaKnown RBP12.73□□□□□ -0.37
USP49-201ENST00000373006 CACUL1Q86Y37 369 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 CYB561A3Q8NBI2 242 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 OR2L2Q8NH16 312 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 OR51Q1Q8NH59 317 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 KCTD12Q96CX2 325 aaKnown RBP12.73□□□□□ -0.37
USP49-201ENST00000373006 OR10A4Q9H209 315 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 EPHX3Q9H6B9 360 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 XKR8Q9H6D3 395 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 C6orf106Q9H6K1 298 aaPredicted RBP12.73□□□□□ -0.37
USP49-201ENST00000373006 NFKBIL1Q9UBC1 381 aaPredicted RBP12.73□□□□□ -0.37
USP49-201ENST00000373006 MTCL1Q9Y4B5 1905 aaKnown RBP12.73□□□□□ -0.37
USP49-201ENST00000373006 PLXNA2O75051 1894 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 A0A1W2PR48 441 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 TGM5O43548 720 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 GMDSO60547 372 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 ALDOBP05062 364 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 RAB3BP20337 219 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 NIPAL3Q6P499 406 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 OR9A2Q8NGT5 310 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 GHSRQ92847 366 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 NUS1Q96E22 293 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 TCEAL4Q96EI5 215 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 SGTBQ96EQ0 304 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 AHCYL2Q96HN2 611 aaKnown RBP12.73□□□□□ -0.37
USP49-201ENST00000373006 ZNF558Q96NG5 402 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 ARHGDIGQ99819 225 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 FAIM2Q9BWQ8 316 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 OR52D1Q9H346 318 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 ZDHHC4Q9NPG8 344 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 IFT46Q9NQC8 304 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 NANSQ9NR45 359 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 PCDHGA9Q9Y5G4 932 aaKnown RBP12.73□□□□□ -0.37
USP49-201ENST00000373006 SCN5AQ14524 2016 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 A0A1B0GVI7 797 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 C4orf51C9J302 202 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 HMGN1P05114 100 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 HOXD4P09016 255 aaPredicted RBP12.73□□□□□ -0.37
USP49-201ENST00000373006 TEAD1P28347 426 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 NOS3P29474 1203 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 PDX1P52945 283 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 LTB4RQ15722 352 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 TMEM44Q2T9K0 475 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 OR8K3Q8NH51 312 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 DOK4Q8TEW6 326 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 PTP4A1Q93096 173 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 ORAI1Q96D31 301 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 WDR89Q96FK6 387 aaPredicted RBP12.73□□□□□ -0.37
USP49-201ENST00000373006 NDC1Q9BTX1 674 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 DPEP2Q9H4A9 486 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 CCDC86Q9H6F5 360 aaKnown RBP12.73□□□□□ -0.37
USP49-201ENST00000373006 ZMIZ1Q9ULJ6 1067 aa12.73□□□□□ -0.37
USP49-201ENST00000373006 A0A0A6YYD5 115 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 PAPLNO95428 1278 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 ADRB1P08588 477 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 ACSM4P0C7M7 580 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 POU3F2P20265 443 aaPredicted RBP12.72□□□□□ -0.37
USP49-201ENST00000373006 GALP22466 123 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 KIAA1024LP59773 190 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms