RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CHFRQ96EP1 664 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 FOXN4Q96NZ1 517 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 SLC22A12Q96S37 553 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 FEVQ99581 238 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 DPH2Q9BQC3 489 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 HDAC8Q9BY41 377 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 FN3KRPQ9HA64 309 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 VNN3Q9NY84 501 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 S100A8P05109 93 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 CSNK1EP49674 416 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 VEGFCP49767 419 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 TPMTP51580 245 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 SH3BP2P78314 561 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF616Q08AN1 781 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 DBPQ10586 325 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 PROX2Q3B8N5 592 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR2D3Q8NGH3 330 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 CACNG6Q9BXT2 260 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 BRF2Q9HAW0 419 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 ACOT13Q9NPJ3 140 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 STARD5Q9NSY2 213 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 SGK494L7N484 410 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 BPNT1O95861 308 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 F3P13726 295 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 ETV4P43268 484 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 RGRP47804 291 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 PRLHRP49683 370 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 CTSCP53634 463 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 CDK5R2Q13319 367 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 COL9A2Q14055 689 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 CES4AQ5XG92 561 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 KCNIP4Q6PIL6 250 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 SLC5A7Q9GZV3 580 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF850A8MQ14 1090 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 RETP07949 1114 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 RAB3AP20336 220 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 SGSHP51688 502 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 MC2RQ01718 297 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 EEF1A2Q05639 463 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 CARD17Q5XLA6 110 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 GDPGP1Q6ZNW5 385 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR14L1PQ8NHC6 308 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 ARRDC3Q96B67 414 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 PITHD1Q9GZP4 211 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 GPN2Q9H9Y4 310 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR6C2Q9NZP2 312 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 B3GNT3Q9Y2A9 372 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 CDK4P11802 303 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 GK3PQ14409 553 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZSCAN4Q8NAM6 433 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 BEST4Q8NFU0 473 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 C7orf34Q96L11 122 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 RDH14Q9HBH5 336 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 NUFIP1Q9UHK0 495 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 A0A1B0GTW7 788 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 A6NL46 340 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 LYRM1O43325 122 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 DCNP07585 359 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 GCGRP47871 477 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 ERVPABLB-1P60509 514 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 SNRPD2P62316 118 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 CSNK2A1P68400 391 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 KCTD18Q6PI47 426 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 C19orf35Q6ZS72 473 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 NOXA1Q86UR1 476 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 ACBD7Q8N6N7 88 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF321PQ8N8H1 164 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 CSNK2A3Q8NEV1 391 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 RASD2Q96D21 266 aa12.53□□□□□ -0.4
RAPGEF1-201ENST00000372189 SORBS2O94875 1100 aaKnown RBP12.52□□□□□ -0.4
RAPGEF1-201ENST00000372189 CXCL10P02778 98 aa12.52□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF789Q5FWF6 425 aa12.52□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR51D1Q8NGF3 324 aa12.52□□□□□ -0.4
RAPGEF1-201ENST00000372189 NANPQ8TBE9 248 aa12.52□□□□□ -0.4
RAPGEF1-201ENST00000372189 BMFQ96LC9 184 aa12.52□□□□□ -0.4
RAPGEF1-201ENST00000372189 HS6ST2Q96MM7 605 aa12.52□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF559Q9BR84 538 aa12.52□□□□□ -0.4
RAPGEF1-201ENST00000372189 DHDHQ9UQ10 334 aa12.52□□□□□ -0.4
RAPGEF1-201ENST00000372189 PRSS21Q9Y6M0 314 aa12.52□□□□□ -0.4
RAPGEF1-201ENST00000372189 GJE1A6NN92 205 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 B4E171 279 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 H7C417 338 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 SEC14L5O43304 696 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 SFTPBP07988 381 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 RPS26P62854 115 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 ARG2P78540 354 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 SGCAQ16586 387 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 CHRFAM7AQ494W8 412 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 DESI1Q6ICB0 168 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 GALNT10Q86SR1 603 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 MS4A15Q8N5U1 240 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 SLC5A8Q8N695 610 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 DTX3Q8N9I9 347 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 ARRDC2Q8TBH0 407 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 TFAP2CQ92754 450 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 FRZBQ92765 325 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 MAP3K3Q99759 626 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 PISDQ9UG56 409 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 INTS6Q9UL03 887 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 LRP5O75197 1615 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms