RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CHRNB1P11230 501 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 NPR2P20594 1047 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 GDI1P31150 447 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 RBM34P42696 430 aaKnown RBP13.25□□□□□ -0.29
CD48-201ENST00000368045 SOX9P48436 509 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 GZMKP49863 264 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 SEC13P55735 322 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 CLDN2P57739 230 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 INSL4Q14641 139 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 CCNJQ5T5M9 372 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 IDNKQ5T6J7 187 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 FCRL6Q6DN72 434 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 ENPP7Q6UWV6 458 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 DGLUCYQ7Z3D6 616 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 UBE2J2Q8N2K1 259 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 ZNF655Q8N720 491 aaPredicted RBP13.25□□□□□ -0.29
CD48-201ENST00000368045 OR10H4Q8NGA5 316 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 LRFN5Q96NI6 719 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 TEAD3Q99594 435 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 CDCA3Q99618 268 aaPredicted RBP13.25□□□□□ -0.29
CD48-201ENST00000368045 ZFYVE21Q9BQ24 234 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 SLX1AQ9BQ83 275 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 IFT27Q9BW83 186 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 IL21RQ9HBE5 538 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 NLKQ9UBE8 527 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 MAU2Q9Y6X3 613 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 ANKRD34BA5PLL1 514 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 A6NCN8 305 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 LRRC72A6NJI9 287 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 SCAMP1O15126 338 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 ARHGEF9O43307 516 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 HRO43593 1189 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 BRINP1O60477 761 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 PTP4A3O75365 173 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 SLC2A5P22732 501 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 ACSL1P33121 698 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 SNRPNP63162 240 aaKnown RBP13.24□□□□□ -0.29
CD48-201ENST00000368045 POU6F2P78424 691 aaPredicted RBP13.24□□□□□ -0.29
CD48-201ENST00000368045 HTRA3P83110 453 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 CSTF1Q05048 431 aaKnown RBP13.24□□□□□ -0.29
CD48-201ENST00000368045 FAPQ12884 760 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 TNK1Q13470 666 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 ZNF57Q68EA5 555 aaPredicted RBP13.24□□□□□ -0.29
CD48-201ENST00000368045 SYCE2Q6PIF2 218 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 PAMR1Q6UXH9 720 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 PXKQ7Z7A4 578 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 MS4A15Q8N5U1 240 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 YIPF7Q8N8F6 280 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 OR4C6Q8NH72 309 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 HOXB13Q92826 284 aaPredicted RBP13.24□□□□□ -0.29
CD48-201ENST00000368045 PTP4A1Q93096 173 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 RERGQ96A58 199 aaPredicted RBP13.24□□□□□ -0.29
CD48-201ENST00000368045 NACC2Q96BF6 587 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 UPRTQ96BW1 309 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 MED20Q9H944 212 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 ENAMQ9NRM1 1142 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 C20orf141Q9NUB4 165 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 ACOXLQ9NUZ1 547 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 ACTR10Q9NZ32 417 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 KCNE5Q9UJ90 142 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 ENTPD2Q9Y5L3 495 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 NOX1Q9Y5S8 564 aa13.24□□□□□ -0.29
CD48-201ENST00000368045 FAM221BA6H8Z2 402 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 POM121BA6NF01 834 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 OR6C70A6NIJ9 312 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 INMT-MINDY4F8WBC2 141 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 CHP2O43745 196 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 IFNGP01579 166 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 SBK2P0C263 348 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 GKN3PP0CG01 181 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 ZNF3P17036 446 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 HK1P19367 917 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 NT5EP21589 574 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 DRD5P21918 477 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 AK4P27144 223 aaPredicted RBP13.23□□□□□ -0.29
CD48-201ENST00000368045 THBS2P35442 1172 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 ACTR1BP42025 376 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 ACTR1AP61163 376 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 RRAS2P62070 204 aaPredicted RBP13.23□□□□□ -0.29
CD48-201ENST00000368045 PPP2CBP62714 309 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 RACK1P63244 317 aaKnown RBP13.23□□□□□ -0.29
CD48-201ENST00000368045 PPP2CAP67775 309 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 ZSWIM7Q19AV6 140 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 KLHL12Q53G59 568 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 THOC7Q6I9Y2 204 aaKnown RBP13.23□□□□□ -0.29
CD48-201ENST00000368045 OAFQ86UD1 273 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 NR2C2APQ86WQ0 139 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 GRAMD2AQ8IUY3 354 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 SLC44A3Q8N4M1 653 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 OR13C2Q8NGS9 318 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 RFT1Q96AA3 541 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 KXD1Q9BQD3 176 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 GTPBP2Q9BX10 602 aaKnown RBP13.23□□□□□ -0.29
CD48-201ENST00000368045 HCAR1Q9BXC0 346 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 HDHD2Q9H0R4 259 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 ATP13A2Q9NQ11 1180 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 NCKAP1Q9Y2A7 1128 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 NPFFR2Q9Y5X5 522 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 CLCA3PQ9Y6N3 262 aa13.23□□□□□ -0.29
CD48-201ENST00000368045 A0A0G2JMP0 313 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms