RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 OPN1LWP04000 364 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 SFTPDP35247 375 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 SOAT1P35610 550 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 C21orf58P58505 322 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 LTBQ06643 244 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 SELENBP1Q13228 472 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 CBFBQ13951 182 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 SMU1Q2TAY7 513 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 KLHL26Q53HC5 615 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 EMBQ6PCB8 327 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 STAC2Q6ZMT1 411 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 ZNF704Q6ZNC4 412 aaPredicted RBP13.25□□□□□ -0.29
CTSD-202ENST00000367196 YTHDF3Q7Z739 585 aaKnown RBP13.25□□□□□ -0.29
CTSD-202ENST00000367196 KIRREL3Q8IZU9 778 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 SLC43A2Q8N370 569 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 TMCO5AQ8N6Q1 288 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 FBXO27Q8NI29 283 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 POC1BQ8TC44 478 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 ZFP90Q8TF47 636 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 TMEM171Q8WVE6 324 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 PERPQ96FX8 193 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 MRGPRX4Q96LA9 322 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 HS3ST6Q96QI5 342 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 USB1Q9BQ65 265 aaKnown RBP13.25□□□□□ -0.29
CTSD-202ENST00000367196 GSX2Q9BZM3 304 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 CXorf36Q9H7Y0 433 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 NGBQ9NPG2 151 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 GPATCH2Q9NW75 528 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 KLHL13Q9P2N7 655 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 ICAM5Q9UMF0 924 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 CARD8Q9Y2G2 431 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 DTNAQ9Y4J8 743 aa13.25□□□□□ -0.29
CTSD-202ENST00000367196 ZNF195O14628 629 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 EIF4E2O60573 245 aaKnown RBP13.24□□□□□ -0.29
CTSD-202ENST00000367196 PRKD3O94806 890 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 SNUPNO95149 360 aaKnown RBP13.24□□□□□ -0.29
CTSD-202ENST00000367196 HEXAP06865 529 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 BPGMP07738 259 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 UBL4AP11441 157 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 SLC7A1P30825 629 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 FCRLAQ7L513 359 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 RIMKLAQ8IXN7 391 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 OIT3Q8WWZ8 545 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 COX4I2Q96KJ9 171 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 OR7D2Q96RA2 312 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 NPAS1Q99742 590 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 NMUR2Q9GZQ4 415 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 C12orf49Q9H741 205 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 ANKZF1Q9H8Y5 726 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 ASIC5Q9NY37 505 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 GIMAP2Q9UG22 337 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 ZDHHC2Q9UIJ5 367 aa13.24□□□□□ -0.29
CTSD-202ENST00000367196 NUP214P35658 2090 aaPredicted RBP13.24□□□□□ -0.29
CTSD-202ENST00000367196 NSD1Q96L73 2696 aaPredicted RBP13.23□□□□□ -0.29
CTSD-202ENST00000367196 ZNF264O43296 627 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 AGR2O95994 175 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 THBDP07204 575 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 PRKCAP17252 672 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 IL32P24001 234 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 LOXP28300 417 aaPredicted RBP13.23□□□□□ -0.29
CTSD-202ENST00000367196 CCR4P51679 360 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 EMX2Q04743 252 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 C3orf33Q6P1S2 294 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 CBLN3Q6UW01 205 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 SSX8Q7RTT4 187 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 WFDC8Q8IUA0 241 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 NUDCD3Q8IVD9 361 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 KRTCAP2Q8N6L1 136 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 OR5W2Q8NH69 310 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 ABHD3Q8WU67 409 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 ROBO4Q8WZ75 1007 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 ARSGQ96EG1 525 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 PLPPR2Q96GM1 343 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 C3orf30Q96M34 536 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 Q96MF0 132 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 EXD2Q9NVH0 621 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 KLHL9Q9P2J3 617 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 PCDHGB4Q9UN71 923 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 HEATR5AQ86XA9 2040 aa13.23□□□□□ -0.29
CTSD-202ENST00000367196 ROS1P08922 2347 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 NPIPA5A0A0B4J1W7 369 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 NPIPA7E9PJI5 369 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 RNASET2O00584 256 aaKnown RBP13.22□□□□□ -0.29
CTSD-202ENST00000367196 HS3ST1O14792 307 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 KLF4O43474 513 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 STX11O75558 287 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 YES1P07947 543 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 NPIPA8P0DM63 369 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 G6PDP11413 515 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 MATN1P21941 496 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 PTH2RP49190 550 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 CLDN8P56748 225 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 RAC3P60763 192 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 VSNL1P62760 191 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 HBA1P69905 142 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 P2RY6Q15077 328 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 PGS1Q32NB8 556 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 TMEM176BQ3YBM2 270 aaPredicted RBP13.22□□□□□ -0.29
CTSD-202ENST00000367196 SLC25A53Q5H9E4 307 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 TFAP2EQ6VUC0 442 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms