RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 RAE1P78406 368 aaKnown RBP7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 PHEXP78562 749 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 SLC18A2Q05940 514 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 C17orf67Q0P5P2 114 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 FOXF1Q12946 379 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 TRAF3Q13114 568 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 RIN1Q13671 783 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 ACAP2Q15057 778 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 TRADDQ15628 312 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 CD226Q15762 336 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 PFKFB4Q16877 469 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 ERCC6LQ2NKX8 1250 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 FRG2Q64ET8 278 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 GTF2IRD2BQ6EKJ0 949 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 USP43Q70EL4 1123 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 RPS27LQ71UM5 84 aaKnown RBP7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 GTF2IRD2Q86UP8 949 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 TRABD2AQ86V40 505 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 P2RY8Q86VZ1 359 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 CENPLQ8N0S6 344 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 FBXO36Q8NEA4 188 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 STAG3L4Q8TBR4 150 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 FBF1Q8TES7 1133 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZNF418Q8TF45 676 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 PIK3R3Q92569 461 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZBTB8AQ96BR9 441 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 ERP27Q96DN0 273 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 SH3YL1Q96HL8 342 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 FRG2BQ96QU4 278 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 VRK1Q99986 396 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 TRMOQ9BU70 441 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 RBM4Q9BWF3 364 aaKnown RBP7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 TBL1XR1Q9BZK7 514 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 LPAR2Q9HBW0 351 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 GP6Q9HCN6 339 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 MYNNQ9NPC7 610 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 NTMQ9P121 344 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 SPEF1Q9Y4P9 236 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 FKBP7Q9Y680 259 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZNF780BQ9Y6R6 833 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 LOC105371242A0A075B767 164 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 UPK1AO00322 258 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 RGS14O43566 566 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 BCAS2O75934 225 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 OXSR1O95747 527 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 IL3P08700 152 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 PABPC4LP0CB38 370 aaKnown RBP7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 CHN1P15882 459 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 STMN1P16949 149 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 EPHA1P21709 976 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 GATA4P43694 442 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 SLC12A2P55011 1212 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 RAB10P61026 200 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 GABPB1Q06547 395 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 DOC2BQ14184 412 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 TOMM34Q15785 309 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 GABRA6Q16445 453 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 DECR1Q16698 335 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 TMEM176BQ3YBM2 270 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 TMEM107Q6UX40 140 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 C1orf52Q8N6N3 182 aaKnown RBP7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 ATP6V1C2Q8NEY4 427 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 ACTRT2Q8TDY3 377 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 CPNE4Q96A23 557 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 MRPL24Q96A35 216 aaKnown RBP7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 MRGPRX4Q96LA9 322 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 SLC6A7Q99884 636 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 NOL11Q9H8H0 719 aaKnown RBP7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 PFDN4Q9NQP4 134 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 HIF1ANQ9NWT6 349 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 TAS2R9Q9NYW1 312 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 SLC12A4Q9UP95 1085 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 MOKQ9UQ07 419 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 ANGPTL3Q9Y5C1 460 aa7.38□□□□□ -1.23
HMGB1P39-201ENST00000366304 ALG1L2C9J202 215 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 PDLIM1O00151 329 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZNF195O14628 629 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 H6PDO95479 791 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 PDYNP01213 254 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 GHRHP01286 108 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 LTA4HP09960 611 aaKnown RBP7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 HKR1P10072 659 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 DAOP14920 347 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 ME2P23368 584 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 GABRA3P34903 492 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 MAP3K8P41279 467 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 UBA52P62987 128 aaKnown RBP7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 PSPHP78330 225 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 SRSF4Q08170 494 aaKnown RBP7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 RASGEF1BQ0VAM2 473 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 MLC1Q15049 377 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 ADIPOQQ15848 244 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 ARL13AQ5H913 290 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 TCHHL1Q5QJ38 904 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 PDSS1Q5T2R2 415 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 C9orf135Q5VTT2 229 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 FBXW9Q5XUX1 488 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 KLHL17Q6TDP4 642 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 PAGE2Q7Z2X7 111 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 SLC46A3Q7Z3Q1 461 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms