RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 CDC42EP4Q9H3Q1 356 aaKnown RBP0.35□□□□□ -2.35
RNU6-238P-201ENST00000363313 COG4Q9H9E3 785 aa0.35□□□□□ -2.35
RNU6-238P-201ENST00000363313 DUS2Q9NX74 493 aaKnown RBP0.35□□□□□ -2.35
RNU6-238P-201ENST00000363313 APPL1Q9UKG1 709 aa0.35□□□□□ -2.35
RNU6-238P-201ENST00000363313 GMPPBQ9Y5P6 360 aa0.35□□□□□ -2.35
RNU6-238P-201ENST00000363313 S4R3C0 116 aa0.35□□□□□ -2.35
RNU6-238P-201ENST00000363313 FLG2Q5D862 2391 aaPredicted RBP0.34□□□□□ -2.35
RNU6-238P-201ENST00000363313 C13orf42A0A1B0GVH6 325 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 ESYT2A0FGR8 921 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 ARHGEF37A1IGU5 675 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 SLC28A1O00337 649 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 CENPBP07199 599 aaPredicted RBP0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 CHTF8P0CG12 524 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 ICAM2P13598 275 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 WARSP23381 471 aaKnown RBP0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 SLC10A7Q0GE19 358 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 PPP2R5CQ13362 524 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 SIM2Q14190 667 aaPredicted RBP0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 KARSQ15046 597 aaKnown RBP0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 PVRIGQ6DKI7 326 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 PRSS41Q7RTY9 318 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 SYNPRQ8TBG9 265 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 PPDPFQ9H3Y8 114 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 FAM124BQ9H5Z6 455 aaPredicted RBP0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZNF629Q9UEG4 869 aaPredicted RBP0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 CDH7Q9ULB5 785 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 PLLPQ9Y342 182 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 TTC21BQ7Z4L5 1316 aa0.34□□□□□ -2.36
RNU6-238P-201ENST00000363313 NUP214P35658 2090 aaPredicted RBP0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 YEATS2Q9ULM3 1422 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 MACF1Q9UPN3 7388 aaKnown RBP0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 A0A0G2JN53 185 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 LOC100131303A0A0U1RQF7 123 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 FBLL1A6NHQ2 334 aaKnown RBP0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZNF705EA8MWA4 302 aaPredicted RBP0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 PPIHO43447 177 aaKnown RBP0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 CRCPO75575 148 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 STK17BO94768 372 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZCCHC18P0CG32 403 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 BCKDHAP12694 445 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 PRKCIP41743 596 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 NPY2RP49146 381 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 TAS2R19P59542 299 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 KRT83P78385 493 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 CNTN2Q02246 1040 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZNF699Q32M78 642 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 ACSF3Q4G176 576 aaPredicted RBP0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 RPUSD3Q6P087 351 aaKnown RBP0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 SMARCD3Q6STE5 483 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 RFLNAQ6ZTI6 216 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 KLHL7Q8IXQ5 586 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZNF664Q8N3J9 261 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 NHLRC2Q8NBF2 726 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 NEK11Q8NG66 645 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 CORO2AQ92828 525 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 ASB9Q96DX5 294 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 PANX3Q96QZ0 392 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 TEKT3Q9BXF9 490 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 TSPYL1Q9H0U9 437 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 EXD2Q9NVH0 621 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 ANAPC5Q9UJX4 755 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 PLA2G4CQ9UP65 541 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZSWIM8A7E2V4 1837 aa0.33□□□□□ -2.36
RNU6-238P-201ENST00000363313 NOTCH1P46531 2555 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 CDRT1O95170 752 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 LALBAP00709 142 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 GIPP09681 153 aaPredicted RBP0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 RDXP35241 583 aaKnown RBP0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 CHRNB3Q05901 458 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 TMEM183BQ1AE95 376 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 BEND6Q5SZJ8 279 aaPredicted RBP0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 NKAIN2Q5VXU1 208 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 FRMPD2BQ6IN97 320 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 SLC30A6Q6NXT4 461 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 BTNL3Q6UXE8 466 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 STHQ8IWL8 128 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 TMEM183AQ8IXX5 376 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 CENPSQ8N2Z9 138 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 OR7G3Q8NG95 312 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 OR51S1Q8NGJ8 323 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 TRUB1Q8WWH5 349 aaKnown RBP0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 NDRG1Q92597 394 aaKnown RBP0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 CFAP36Q96G28 342 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 MCHR1Q99705 422 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 LZTS2Q9BRK4 669 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 NLNQ9BYT8 704 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 OR10A4Q9H209 315 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZNF226Q9NYT6 803 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 MIOXQ9UGB7 285 aa0.32□□□□□ -2.36
RNU6-238P-201ENST00000363313 PTPRTO14522 1441 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 DNASE2O00115 360 aaPredicted RBP0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 SLC35G4P0C7Q5 338 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 LINC00869P0C866 280 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 RBMY1A1P0DJD3 496 aaKnown RBP0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 RBMY1CP0DJD4 496 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 ALPPL2P10696 532 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 TCN2P20062 427 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 CXCL5P42830 114 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 SCN1BQ07699 218 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZNF816Q0VGE8 651 aaPredicted RBP0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms