RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ZNF524Q96C55 264 aa13.53□□□□□ -0.24
CCNE1-202ENST00000357943 BBC3Q96PG8 261 aaPredicted RBP13.53□□□□□ -0.24
CCNE1-202ENST00000357943 LAT2Q9GZY6 243 aa13.53□□□□□ -0.24
CCNE1-202ENST00000357943 RASSF4Q9H2L5 321 aa13.53□□□□□ -0.24
CCNE1-202ENST00000357943 ARMC7Q9H6L4 198 aa13.53□□□□□ -0.24
CCNE1-202ENST00000357943 EXOSC3Q9NQT5 275 aaKnown RBP13.53□□□□□ -0.24
CCNE1-202ENST00000357943 C15orf41Q9Y2V0 281 aa13.53□□□□□ -0.24
CCNE1-202ENST00000357943 H0YHG0 523 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 SUV39H1O43463 412 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 CBR3O75828 277 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 PRG2P13727 222 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 GDF1P27539 372 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 RYKP34925 604 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 MAGEA5P43359 124 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 PPIAP62937 165 aaKnown RBP13.52□□□□□ -0.25
CCNE1-202ENST00000357943 HOXC5Q00444 222 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 NFATC3Q12968 1075 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 ELOAQ14241 798 aaKnown RBP13.52□□□□□ -0.25
CCNE1-202ENST00000357943 TOMM34Q15785 309 aaPredicted RBP13.52□□□□□ -0.25
CCNE1-202ENST00000357943 HYAL4Q2M3T9 481 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 EIPR1Q53HC9 387 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 LCN8Q6JVE9 175 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 ARSKQ6UWY0 536 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 LACC1Q8IV20 430 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 FAM86B1Q8N7N1 296 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 BHLHE22Q8NFJ8 381 aaPredicted RBP13.52□□□□□ -0.25
CCNE1-202ENST00000357943 OR52E4Q8NGH9 312 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 OR4D11Q8NGI4 311 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 OR5W2Q8NH69 310 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 MUC13Q9H3R2 512 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 ADPRHL2Q9NX46 363 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 BAG5Q9UL15 447 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 VDAC3Q9Y277 283 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 SH3GLB1Q9Y371 365 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 V9GYQ6 96 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 ZFYVE26Q68DK2 2539 aa13.52□□□□□ -0.25
CCNE1-202ENST00000357943 SPTA1P02549 2419 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 M0R3H8 397 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 SYT5O00445 386 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 AP3D1O14617 1153 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 CDC40O60508 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCNE1-202ENST00000357943 WISP2O76076 250 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 NUDT14O95848 222 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 C8BP07358 591 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 CELA3AP09093 270 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 ZNF24P17028 368 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 MSX1P28360 303 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 OR1E2P47887 323 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 TRAP1Q12931 704 aaKnown RBP13.51□□□□□ -0.25
CCNE1-202ENST00000357943 TOMM20Q15388 145 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 INAQ16352 499 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 ZSWIM7Q19AV6 140 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 ENPP6Q6UWR7 440 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 SLC22A16Q86VW1 577 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 RBM45Q8IUH3 476 aaKnown RBP13.51□□□□□ -0.25
CCNE1-202ENST00000357943 CISD2Q8N5K1 135 aaKnown RBP13.51□□□□□ -0.25
CCNE1-202ENST00000357943 TOR1AIP2Q8NFQ8 470 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 HSH2DQ96JZ2 352 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 ARHGDIGQ99819 225 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 TSPAN10Q9H1Z9 355 aaPredicted RBP13.51□□□□□ -0.25
CCNE1-202ENST00000357943 PTGES2Q9H7Z7 377 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 KLHL28Q9NXS3 571 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 RPS6KA6Q9UK32 745 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 SLC13A4Q9UKG4 626 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 NTNG1Q9Y2I2 539 aa13.51□□□□□ -0.25
CCNE1-202ENST00000357943 ANKUB1A6NFN9 424 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 ACOT7O00154 380 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 TPST2O60704 377 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 PRKD3O94806 890 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 TCEA1P23193 301 aaKnown RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 DPP4P27487 766 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 ACAA2P42765 397 aaKnown RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 ERFP50548 548 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 ZNF136P52737 540 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 DSCR4P56555 118 aaPredicted RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 ELF3P78545 371 aaPredicted RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 FOXK1P85037 733 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 EPS8Q12929 822 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 CBFBQ13951 182 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 FLOT2Q14254 428 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 NRF1Q16656 503 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 PRR30Q53SZ7 412 aaPredicted RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 EID3Q8N140 333 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 OR6T1Q8NGN1 323 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 VANGL1Q8TAA9 524 aaPredicted RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 GPR119Q8TDV5 335 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 LZICQ8WZA0 190 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 PROX1Q92786 737 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 C1GALT1C1Q96EU7 318 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 RNF145Q96MT1 663 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 NPAS1Q99742 590 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 PRR14Q9BWN1 585 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 HHATLQ9HCP6 504 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 B4GALT7Q9UBV7 327 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 SAMD4AQ9UPU9 718 aaKnown RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 RELNP78509 3460 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 TCRBV5S2A0A599 114 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 TFECO14948 347 aaPredicted RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 ZIC3O60481 467 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 TRAPPC6AO75865 159 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms