RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 GOLGA4Q13439 2230 aaKnown RBP15.83■□□□□ 0.12
VPS13B-201ENST00000355155 PTP4A3O75365 173 aa15.82■□□□□ 0.12
VPS13B-201ENST00000355155 UTS2O95399 124 aa15.82■□□□□ 0.12
VPS13B-201ENST00000355155 NEDD8Q15843 81 aa15.82■□□□□ 0.12
VPS13B-201ENST00000355155 ACSM5Q6NUN0 579 aa15.82■□□□□ 0.12
VPS13B-201ENST00000355155 RRM2BQ7LG56 351 aa15.82■□□□□ 0.12
VPS13B-201ENST00000355155 RAB2BQ8WUD1 216 aa15.82■□□□□ 0.12
VPS13B-201ENST00000355155 CTPS2Q9NRF8 586 aa15.82■□□□□ 0.12
VPS13B-201ENST00000355155 PTGES3LE9PB15 166 aa15.82■□□□□ 0.12
VPS13B-201ENST00000355155 ADAM10O14672 748 aa15.82■□□□□ 0.12
VPS13B-201ENST00000355155 TRMUO75648 421 aaKnown RBP15.82■□□□□ 0.12
VPS13B-201ENST00000355155 NAGAP17050 411 aa15.82■□□□□ 0.12
VPS13B-201ENST00000355155 SLC29A4Q7RTT9 530 aa15.82■□□□□ 0.12
VPS13B-201ENST00000355155 B3GNT7Q8NFL0 401 aa15.82■□□□□ 0.12
VPS13B-201ENST00000355155 OR8D2Q9GZM6 311 aa15.82■□□□□ 0.12
VPS13B-201ENST00000355155 UNC119BA6NIH7 251 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 ALG1L2C9J202 215 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 H3BN98 237 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 GALR2O43603 387 aaPredicted RBP15.81■□□□□ 0.12
VPS13B-201ENST00000355155 PIP5K1CO60331 668 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 CNOT3O75175 753 aaKnown RBP15.81■□□□□ 0.12
VPS13B-201ENST00000355155 SOX14O95416 240 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 GAS1P54826 345 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 PIGFQ07326 219 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 CLVS1Q8IUQ0 354 aaPredicted RBP15.81■□□□□ 0.12
VPS13B-201ENST00000355155 APCDD1LQ8NCL9 501 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 JAM3Q9BX67 310 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 ARRDC1-AS1Q9H2J1 176 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 ENPP5Q9UJA9 477 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 MED31Q9Y3C7 131 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 RPL36Q9Y3U8 105 aaKnown RBP15.81■□□□□ 0.12
VPS13B-201ENST00000355155 A0A087WUJ7 227 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 IRGMA1A4Y4 181 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 IDSB3KWA1 339 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 EIF4E2O60573 245 aaKnown RBP15.81■□□□□ 0.12
VPS13B-201ENST00000355155 CSTAP01040 98 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 CSTF2P33240 577 aaKnown RBP eCLIP15.81■□□□□ 0.12
VPS13B-201ENST00000355155 SLC6A8P48029 635 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 RHNO1Q9BSD3 238 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 DSN1Q9H410 356 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 FN3KQ9H479 309 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 C11orf16Q9NQ32 467 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 MEPEQ9NQ76 525 aaPredicted RBP15.81■□□□□ 0.12
VPS13B-201ENST00000355155 BAIAP2Q9UQB8 552 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 ASXL3Q9C0F0 2248 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 UNC13CQ8NB66 2214 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 OR6C70A6NIJ9 312 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 H3BMQ9 156 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 PRKYO43930 277 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 FXYD6P3P58550 94 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 PGGHGQ32M88 737 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 PLAG1Q6DJT9 500 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 GALNT15Q8N3T1 639 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 RORBQ92753 470 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 C12orf43Q96C57 262 aaKnown RBP15.81■□□□□ 0.12
VPS13B-201ENST00000355155 COG8Q96MW5 612 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 TMEM43Q9BTV4 400 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 EGLN3Q9H6Z9 239 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 PCDHGB6Q9Y5F9 930 aa15.81■□□□□ 0.12
VPS13B-201ENST00000355155 CDC42EP2O14613 210 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 SURF4O15260 269 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 ENTPD6O75354 484 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 GABARAPO95166 117 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 HMGN1P05114 100 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 HEXBP07686 556 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 MAKP20794 623 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 FHL1Q13642 323 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 SLC16A12Q6ZSM3 486 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 LANCL3Q6ZV70 420 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 AHSA2Q719I0 299 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 OR4Q3Q8NH05 313 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 CLIP3Q96DZ5 547 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 GTPBP2Q9BX10 602 aaKnown RBP15.8■□□□□ 0.12
VPS13B-201ENST00000355155 SLC7A5P2Q9GIP4 190 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 FGF20Q9NP95 211 aaPredicted RBP15.8■□□□□ 0.12
VPS13B-201ENST00000355155 CNIH4Q9P003 139 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 SPTBP11277 2137 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 GON4LQ3T8J9 2241 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 INMTO95050 263 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 UBL4AP11441 157 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 SLC9A3P48764 834 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 TMED1Q13445 227 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 SYT14P1Q58G82 188 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 WBP2NLQ6ICG8 309 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 VMP1Q96GC9 406 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 SLC38A2Q96QD8 506 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 SIGLEC7Q9Y286 467 aa15.8■□□□□ 0.12
VPS13B-201ENST00000355155 TMX2-CTNND1H3BSU7 103 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 MEN1O00255 615 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 SCDO00767 359 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 BHLHE40O14503 412 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 FADS1O60427 444 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 CBFA2T3O75081 653 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 RCBTB2O95199 551 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 POU1F1P28069 291 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 RNF4P78317 190 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 AADACL4Q5VUY2 407 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 CDCP2Q5VXM1 449 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 C19orf48Q6RUI8 117 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 KIRREL2Q6UWL6 708 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms