RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 RNASEH2BQ5TBB1 312 aaKnown RBP10.07□□□□□ -0.8
RTN3-204ENST00000354497 OR5M10Q6IEU7 315 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 FIP1L1Q6UN15 594 aaKnown RBP10.07□□□□□ -0.8
RTN3-204ENST00000354497 NUP54Q7Z3B4 507 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 KCTD20Q7Z5Y7 419 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 GPSM1Q86YR5 675 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 PLCZ1Q86YW0 608 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 PPIL6Q8IXY8 311 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 ZNF615Q8N8J6 731 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 WDSUB1Q8N9V3 476 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 WDR34Q96EX3 536 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 HS6ST2Q96MM7 605 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 ZNF347Q96SE7 839 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 NTMT1Q9BV86 223 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 PINK1Q9BXM7 581 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 ITPAQ9BY32 194 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 CXorf21Q9HAI6 301 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 LYARQ9NX58 379 aaKnown RBP10.07□□□□□ -0.8
RTN3-204ENST00000354497 NPAP1Q9NZP6 1156 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 CD274Q9NZQ7 290 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 BCAP29Q9UHQ4 241 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 FBXL2Q9UKC9 423 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 A0A1W2PR48 441 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 FRG2CA6NGY1 282 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 PLPP1O14494 284 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 EMC8O43402 210 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 UGT2B11O75310 529 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 AIFM1O95831 613 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 CGAP01215 116 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 CD8BP10966 210 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 PPP3CBP16298 524 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 PIK3R1P27986 724 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 RRM2P31350 389 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 GALNSP34059 522 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 GMPRP36959 345 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 SLC12A2P55011 1212 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 TAS2R39P59534 338 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 MYBPC1Q00872 1141 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 MPP2Q14168 576 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 FGFBP1Q14512 234 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 SULT1C3Q6IMI6 304 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 IGDCC3Q8IVU1 814 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 ZCCHC7Q8N3Z6 543 aaKnown RBP10.06□□□□□ -0.8
RTN3-204ENST00000354497 LHFPL5Q8TAF8 219 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 MTBPQ96DY7 904 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 TRIM15Q9C019 465 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 BRINP2Q9C0B6 783 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 SHARPINQ9H0F6 387 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 SLA2Q9H6Q3 261 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 IFT22Q9H7X7 185 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 LRTM1Q9HBL6 345 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 WHRNQ9P202 907 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 KIF17Q9P2E2 1029 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 LIPT1Q9Y234 373 aa10.06□□□□□ -0.8
RTN3-204ENST00000354497 TMA7Q9Y2S6 64 aaKnown RBP10.06□□□□□ -0.8
RTN3-204ENST00000354497 MAGED1Q9Y5V3 778 aaPredicted RBP10.06□□□□□ -0.8
RTN3-204ENST00000354497 TRIM77I1YAP6 450 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 TMPRSS11DO60235 418 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 NDUFS7O75251 213 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 EEDO75530 441 aaKnown RBP10.05□□□□□ -0.8
RTN3-204ENST00000354497 IGHV4-39P01824 125 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 GBAP04062 536 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 SOD3P08294 240 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 RPS17P08708 135 aaKnown RBP10.05□□□□□ -0.8
RTN3-204ENST00000354497 PEPDP12955 493 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 PRKACAP17612 351 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 DCKP27707 260 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 SERPINB1P30740 379 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 CASP2P42575 452 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 ETV1P50549 477 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 AQP4P55087 323 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 WDR4P57081 412 aaKnown RBP10.05□□□□□ -0.8
RTN3-204ENST00000354497 SNTA1Q13424 505 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 LAPTM4AQ15012 233 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 CYP1B1Q16678 543 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 RAET1LQ5VY80 246 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 ZFP1Q6P2D0 407 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 PGM2L1Q6PCE3 622 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 TRMT10BQ6PF06 316 aaKnown RBP10.05□□□□□ -0.8
RTN3-204ENST00000354497 RAPH1Q70E73 1250 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 LAS2Q8IYD9 372 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 ELMOD2Q8IZ81 293 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 TSPAN14Q8NG11 270 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 OR7G3Q8NG95 312 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 OR4K17Q8NGC6 315 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 HUS1BQ8NHY5 278 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 FNDC9Q8TBE3 224 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 RAB3IL1Q8TBN0 382 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 EPS8L3Q8TE67 593 aaKnown RBP10.05□□□□□ -0.8
RTN3-204ENST00000354497 FBXW5Q969U6 566 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 CIDECQ96AQ7 238 aaPredicted RBP10.05□□□□□ -0.8
RTN3-204ENST00000354497 TMCO6Q96DC7 493 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 NRBF2Q96F24 287 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 MTERF1Q99551 399 aaKnown RBP10.05□□□□□ -0.8
RTN3-204ENST00000354497 ACTR6Q9GZN1 396 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 VPS11Q9H270 941 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 SP140LQ9H930 580 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 SIAEQ9HAT2 523 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 ARL8BQ9NVJ2 186 aa10.05□□□□□ -0.8
RTN3-204ENST00000354497 LPAR3Q9UBY5 353 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms