RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 MLC1Q15049 377 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 CRTC2Q53ET0 693 aaPredicted RBP12.89□□□□□ -0.35
TRIM4-201ENST00000349062 PAMR1Q6UXH9 720 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 WDR88Q6ZMY6 472 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.89□□□□□ -0.35
TRIM4-201ENST00000349062 OR6F1Q8NGZ6 308 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 OR4Q3Q8NH05 313 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 PHF7Q9BWX1 381 aaPredicted RBP12.89□□□□□ -0.35
TRIM4-201ENST00000349062 ASPNQ9BXN1 380 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 PCOLCE2Q9UKZ9 415 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 RTTNQ86VV8 2226 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 FAM172BPA6NC97 362 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 CYR61O00622 381 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 PLD2O14939 933 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 TMCC2O75069 709 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 NUDT14O95848 222 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 HBQ1P09105 142 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 BMP7P18075 431 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 CELP19835 753 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 UBE2IP63279 158 aaKnown RBP12.88□□□□□ -0.35
TRIM4-201ENST00000349062 CSNK2BP67870 215 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 RUNX1T1Q06455 604 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 KRR1Q13601 381 aaKnown RBP12.88□□□□□ -0.35
TRIM4-201ENST00000349062 ZNHIT3Q15649 155 aaPredicted RBP12.88□□□□□ -0.35
TRIM4-201ENST00000349062 SSX1Q16384 188 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 PTCRAQ6ISU1 281 aaPredicted RBP12.88□□□□□ -0.35
TRIM4-201ENST00000349062 FAM131AQ6UXB0 335 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 RNF44Q7L0R7 432 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 RANBP3LQ86VV4 465 aaPredicted RBP12.88□□□□□ -0.35
TRIM4-201ENST00000349062 OR52I1Q8NGK6 324 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 TRMT61AQ96FX7 289 aaKnown RBP12.88□□□□□ -0.35
TRIM4-201ENST00000349062 DGAT2Q96PD7 388 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 GFM1Q96RP9 751 aaKnown RBP12.88□□□□□ -0.35
TRIM4-201ENST00000349062 BCL2L10Q9HD36 194 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 LRIT1Q9P2V4 623 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 FBXL4Q9UKA2 621 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 TMEM184BQ9Y519 407 aaPredicted RBP12.88□□□□□ -0.35
TRIM4-201ENST00000349062 A0A1W2PPK0 400 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 CDRT1O95170 752 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 HTR2AP28223 471 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 CSTF2P33240 577 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRIM4-201ENST00000349062 FAM53BQ14153 422 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 ELOCQ15369 112 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 ZNF321PQ8N8H1 164 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 OR7G1Q8NGA0 311 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 OR10H4Q8NGA5 316 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 SUN5Q8TC36 379 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 MOAP1Q96BY2 351 aa12.88□□□□□ -0.35
TRIM4-201ENST00000349062 HYKKA2RU49 373 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 TGFBR3LH3BV60 316 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 PSMD9O00233 223 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 SRFP11831 508 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 PSMA1P25786 263 aaKnown RBP12.87□□□□□ -0.35
TRIM4-201ENST00000349062 MTNR1AP48039 350 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 HCCSP53701 268 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 ZNF628Q5EBL2 1059 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 TMPRSS11AQ6ZMR5 421 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 TMEM151BQ8IW70 566 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 NT5CQ8TCD5 201 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 GNPDA2Q8TDQ7 276 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 DIO2Q92813 273 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 TM4SF19Q96DZ7 209 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 SECISBP2Q96T21 854 aaKnown RBP12.87□□□□□ -0.35
TRIM4-201ENST00000349062 TMEM150CB9EJG8 249 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 MPZL2O60487 215 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 PRKCAP17252 672 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 MAKP20794 623 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 HTR2BP41595 481 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 CRYZQ08257 329 aaKnown RBP12.87□□□□□ -0.35
TRIM4-201ENST00000349062 ZNF619Q8N2I2 560 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 OR2L13Q8N349 312 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 RCBTB1Q8NDN9 531 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 FCGR1BQ92637 280 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 PMEPA1Q969W9 287 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 ANKRD9Q96BM1 317 aaPredicted RBP12.87□□□□□ -0.35
TRIM4-201ENST00000349062 OPALINQ96PE5 141 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 SEMA6CQ9H3T2 930 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 CLEC4AQ9UMR7 237 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 C19orf53Q9UNZ5 99 aaPredicted RBP12.87□□□□□ -0.35
TRIM4-201ENST00000349062 HEATR5AQ86XA9 2040 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 FREM2Q5SZK8 3169 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 C2orf92A0A1B0GVN3 265 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 A0A1B0GVT2 93 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 MEIOCA2RUB1 952 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 NCR1O76036 304 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 TP53P04637 393 aaPredicted RBP12.87□□□□□ -0.35
TRIM4-201ENST00000349062 RPL4P36578 427 aaKnown RBP12.87□□□□□ -0.35
TRIM4-201ENST00000349062 BAK1Q16611 211 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 VWA2Q5GFL6 755 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 FAM209AQ5JX71 171 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 LAX1Q8IWV1 398 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 FANK1Q8TC84 345 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 ACOT11Q8WXI4 607 aaPredicted RBP12.87□□□□□ -0.35
TRIM4-201ENST00000349062 TSLPQ969D9 159 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 PIGUQ9H490 435 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 RPS6KB2Q9UBS0 482 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 ENTPD2Q9Y5L3 495 aa12.87□□□□□ -0.35
TRIM4-201ENST00000349062 MPDZO75970 2070 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 CCDC182A6NF36 153 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 CD8B2A6NJW9 211 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms