RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 THBS2P35442 1172 aa16.59■□□□□ 0.25
APP-202ENST00000348990 STX4Q12846 297 aa16.59■□□□□ 0.25
APP-202ENST00000348990 AGERQ15109 404 aa16.59■□□□□ 0.25
APP-202ENST00000348990 ZNF613Q6PF04 617 aa16.59■□□□□ 0.25
APP-202ENST00000348990 AMZ2Q86W34 360 aa16.59■□□□□ 0.25
APP-202ENST00000348990 THAP4Q8WY91 577 aa16.59■□□□□ 0.25
APP-202ENST00000348990 NUS1Q96E22 293 aa16.59■□□□□ 0.25
APP-202ENST00000348990 ACTR6Q9GZN1 396 aa16.59■□□□□ 0.25
APP-202ENST00000348990 ENKD1Q9H0I2 346 aa16.59■□□□□ 0.25
APP-202ENST00000348990 SYNDIG1Q9H7V2 258 aa16.59■□□□□ 0.25
APP-202ENST00000348990 CD93Q9NPY3 652 aa16.59■□□□□ 0.25
APP-202ENST00000348990 NRG2O14511 850 aaPredicted RBP16.58■□□□□ 0.25
APP-202ENST00000348990 CCL16O15467 120 aa16.58■□□□□ 0.25
APP-202ENST00000348990 FMO6PO60774 539 aa16.58■□□□□ 0.25
APP-202ENST00000348990 RLN1P04808 185 aa16.58■□□□□ 0.25
APP-202ENST00000348990 CSNK2A2P19784 350 aaPredicted RBP16.58■□□□□ 0.25
APP-202ENST00000348990 TEAD1P28347 426 aa16.58■□□□□ 0.25
APP-202ENST00000348990 ZP1P60852 638 aa16.58■□□□□ 0.25
APP-202ENST00000348990 LTB4RQ15722 352 aa16.58■□□□□ 0.25
APP-202ENST00000348990 C6orf132Q5T0Z8 1188 aa16.58■□□□□ 0.25
APP-202ENST00000348990 DCUN1D3Q8IWE4 304 aa16.58■□□□□ 0.25
APP-202ENST00000348990 LGALS14Q8TCE9 139 aa16.58■□□□□ 0.25
APP-202ENST00000348990 NARS2Q96I59 477 aaKnown RBP16.58■□□□□ 0.25
APP-202ENST00000348990 ARL6Q9H0F7 186 aa16.58■□□□□ 0.25
APP-202ENST00000348990 FBXL4Q9UKA2 621 aa16.58■□□□□ 0.25
APP-202ENST00000348990 ATG4BQ9Y4P1 393 aa16.58■□□□□ 0.25
APP-202ENST00000348990 TCRBV16S1A1N1A0A5B0 115 aa16.58■□□□□ 0.24
APP-202ENST00000348990 UNC119BA6NIH7 251 aa16.58■□□□□ 0.24
APP-202ENST00000348990 LATO43561 262 aa16.58■□□□□ 0.24
APP-202ENST00000348990 HOXD4P09016 255 aaPredicted RBP16.58■□□□□ 0.24
APP-202ENST00000348990 NAA10P41227 235 aaPredicted RBP16.58■□□□□ 0.24
APP-202ENST00000348990 RAD52P43351 418 aa16.58■□□□□ 0.24
APP-202ENST00000348990 TMEM215Q68D42 235 aa16.58■□□□□ 0.24
APP-202ENST00000348990 C11orf88Q6PI97 169 aa16.58■□□□□ 0.24
APP-202ENST00000348990 APOOLQ6UXV4 268 aa16.58■□□□□ 0.24
APP-202ENST00000348990 CDK20Q8IZL9 346 aa16.58■□□□□ 0.24
APP-202ENST00000348990 OR2T4Q8NH00 348 aa16.58■□□□□ 0.24
APP-202ENST00000348990 OR5J2Q8NH18 312 aa16.58■□□□□ 0.24
APP-202ENST00000348990 SLC38A1Q9H2H9 487 aa16.58■□□□□ 0.24
APP-202ENST00000348990 LYARQ9NX58 379 aaKnown RBP16.58■□□□□ 0.24
APP-202ENST00000348990 WSB2Q9NYS7 404 aaPredicted RBP16.58■□□□□ 0.24
APP-202ENST00000348990 NFKBIL1Q9UBC1 381 aaPredicted RBP16.58■□□□□ 0.24
APP-202ENST00000348990 WNT6Q9Y6F9 365 aa16.58■□□□□ 0.24
APP-202ENST00000348990 A0A1W2PQ45 241 aaPredicted RBP16.58■□□□□ 0.24
APP-202ENST00000348990 A0A1W2PQY0 241 aa16.58■□□□□ 0.24
APP-202ENST00000348990 ANTXRLA6NF34 631 aa16.58■□□□□ 0.24
APP-202ENST00000348990 SIX6O95475 246 aa16.58■□□□□ 0.24
APP-202ENST00000348990 CCNJQ5T5M9 372 aa16.58■□□□□ 0.24
APP-202ENST00000348990 NIPAL3Q6P499 406 aa16.58■□□□□ 0.24
APP-202ENST00000348990 ZNF547Q8IVP9 402 aa16.58■□□□□ 0.24
APP-202ENST00000348990 KLHDC8AQ8IYD2 350 aa16.58■□□□□ 0.24
APP-202ENST00000348990 FERD3LQ96RJ6 166 aa16.58■□□□□ 0.24
APP-202ENST00000348990 SLC25A18Q9H1K4 315 aa16.58■□□□□ 0.24
APP-202ENST00000348990 LHX9Q9NQ69 397 aa16.58■□□□□ 0.24
APP-202ENST00000348990 POMT2Q9UKY4 750 aa16.58■□□□□ 0.24
APP-202ENST00000348990 COPS3Q9UNS2 423 aa16.58■□□□□ 0.24
APP-202ENST00000348990 H3BSH0 61 aa16.57■□□□□ 0.24
APP-202ENST00000348990 CACNB4O00305 520 aaPredicted RBP16.57■□□□□ 0.24
APP-202ENST00000348990 DRD2P14416 443 aa16.57■□□□□ 0.24
APP-202ENST00000348990 PSMB1P20618 241 aaKnown RBP16.57■□□□□ 0.24
APP-202ENST00000348990 PDX1P52945 283 aa16.57■□□□□ 0.24
APP-202ENST00000348990 HTR4Q13639 388 aa16.57■□□□□ 0.24
APP-202ENST00000348990 DPPA4Q7L190 304 aa16.57■□□□□ 0.24
APP-202ENST00000348990 TPRA1Q86W33 373 aa16.57■□□□□ 0.24
APP-202ENST00000348990 OR4C6Q8NH72 309 aa16.57■□□□□ 0.24
APP-202ENST00000348990 PFN4Q8NHR9 129 aa16.57■□□□□ 0.24
APP-202ENST00000348990 C1orf216Q8TAB5 229 aa16.57■□□□□ 0.24
APP-202ENST00000348990 HGDQ93099 445 aa16.57■□□□□ 0.24
APP-202ENST00000348990 BCL2L10Q9HD36 194 aa16.57■□□□□ 0.24
APP-202ENST00000348990 PLXNB3Q9ULL4 1909 aa16.57■□□□□ 0.24
APP-202ENST00000348990 RIIAD1A6NNX1 92 aa16.57■□□□□ 0.24
APP-202ENST00000348990 TRIM77I1YAP6 450 aa16.57■□□□□ 0.24
APP-202ENST00000348990 PSMD9O00233 223 aa16.57■□□□□ 0.24
APP-202ENST00000348990 NAGAP17050 411 aa16.57■□□□□ 0.24
APP-202ENST00000348990 SYN1P17600 705 aa16.57■□□□□ 0.24
APP-202ENST00000348990 ANXA7P20073 488 aaKnown RBP16.57■□□□□ 0.24
APP-202ENST00000348990 AKR1D1P51857 326 aa16.57■□□□□ 0.24
APP-202ENST00000348990 ARHGDIBP52566 201 aa16.57■□□□□ 0.24
APP-202ENST00000348990 DUSP2Q05923 314 aa16.57■□□□□ 0.24
APP-202ENST00000348990 CST9Q5W186 159 aa16.57■□□□□ 0.24
APP-202ENST00000348990 GPAT4Q86UL3 456 aa16.57■□□□□ 0.24
APP-202ENST00000348990 ADIPOR2Q86V24 386 aa16.57■□□□□ 0.24
APP-202ENST00000348990 ARL14Q8N4G2 192 aa16.57■□□□□ 0.24
APP-202ENST00000348990 SNX33Q8WV41 574 aa16.57■□□□□ 0.24
APP-202ENST00000348990 IRF7Q92985 503 aa16.57■□□□□ 0.24
APP-202ENST00000348990 CNRIP1Q96F85 164 aaPredicted RBP16.57■□□□□ 0.24
APP-202ENST00000348990 DTD2Q96FN9 168 aa16.57■□□□□ 0.24
APP-202ENST00000348990 DERL3Q96Q80 235 aa16.57■□□□□ 0.24
APP-202ENST00000348990 ZNF649Q9BS31 505 aa16.57■□□□□ 0.24
APP-202ENST00000348990 HCFC1R1Q9NWW0 138 aa16.57■□□□□ 0.24
APP-202ENST00000348990 TRAV27A0A087WT01 109 aa16.57■□□□□ 0.24
APP-202ENST00000348990 OR5M10Q6IEU7 315 aa16.57■□□□□ 0.24
APP-202ENST00000348990 MBOAT2Q6ZWT7 520 aa16.57■□□□□ 0.24
APP-202ENST00000348990 OR56A1Q8NGH5 318 aa16.57■□□□□ 0.24
APP-202ENST00000348990 SMPDL3BQ92485 455 aa16.57■□□□□ 0.24
APP-202ENST00000348990 TMEM138Q9NPI0 162 aa16.57■□□□□ 0.24
APP-202ENST00000348990 KLK11Q9UBX7 282 aa16.57■□□□□ 0.24
APP-202ENST00000348990 WDR45Q9Y484 360 aa16.57■□□□□ 0.24
APP-202ENST00000348990 KNL1Q8NG31 2342 aa16.57■□□□□ 0.24
APP-202ENST00000348990 ALPK2Q86TB3 2170 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms