RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 C17orf67Q0P5P2 114 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 EPS8Q12929 822 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 KCNAB2Q13303 367 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 SNTA1Q13424 505 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 ZSWIM7Q19AV6 140 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 COL28A1Q2UY09 1125 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 HMBOX1Q6NT76 420 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 ZFP1Q6P2D0 407 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 AAGABQ6PD74 315 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 PIWIL3Q7Z3Z3 882 aaKnown RBP17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 TMCO5AQ8N6Q1 288 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 LRTOMTQ8WZ04 291 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 SLC39A7Q92504 469 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 STMN2Q93045 179 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 POP5Q969H6 163 aaKnown RBP17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 ZNF300Q96RE9 604 aaPredicted RBP17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 MCHR1Q99705 422 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 PKP2Q99959 881 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 EXOSC3Q9NQT5 275 aaKnown RBP17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 KLHL1Q9NR64 748 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 VNN3Q9NY84 501 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 PPP4R1LQ9P1A2 415 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 NKX1-2Q9UD57 310 aaPredicted RBP17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 PCDHGA9Q9Y5G4 932 aaKnown RBP17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 IGLV3-32A0A0A0MS00 114 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 CDK2AP1O14519 115 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 EIF4E2O60573 245 aaKnown RBP17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 TRIM3O75382 744 aaPredicted RBP17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 PRSS23O95084 383 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 WISP1O95388 367 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 THY1P04216 161 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 SP1P08047 785 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 CNR1P21554 472 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 TNFSF10P50591 281 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 RCN1Q15293 331 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 TOMM34Q15785 309 aaPredicted RBP17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 LINC00303Q3SY05 128 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 SLC25A25Q6KCM7 469 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 MISPQ8IVT2 679 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 OR2M3Q8NG83 312 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 B4GALNT2Q8NHY0 566 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 DSN1Q9H410 356 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 ARMC7Q9H6L4 198 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 TUBA8Q9NY65 449 aaPredicted RBP17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 RHCGQ9UBD6 479 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 FBXL2Q9UKC9 423 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 A4GNTQ9UNA3 340 aa17.31■□□□□ 0.36
CHMP4A-201ENST00000347519 CPSF4LA6NMK7 179 aaKnown RBP17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 SNPHO15079 494 aa17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 P2RX1P51575 399 aa17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 CCR4P51679 360 aa17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 PIN1Q13526 163 aaPredicted RBP17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 ENTPD8Q5MY95 495 aa17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 ZNF550Q7Z398 422 aa17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 AMIGO2Q86SJ2 522 aa17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 SULF2Q8IWU5 870 aa17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 FADS6Q8N9I5 356 aa17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 SLC35B4Q969S0 331 aa17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 SCMH1Q96GD3 660 aa17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 TMEM41AQ96HV5 264 aa17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 FAM208BQ5VWN6 2430 aa17.3■□□□□ 0.36
CHMP4A-201ENST00000347519 LRRC3CA6NJW4 275 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 NME2P1O60361 137 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 LYPD3O95274 346 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 NTN1O95631 604 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 ENDOUP21128 410 aaKnown RBP17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 NME2P22392 152 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 MST1P26927 711 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 FOXO1Q12778 655 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 FOXD4Q12950 439 aaPredicted RBP17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 PPP1R8Q12972 351 aaKnown RBP17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 GANABQ14697 944 aaKnown RBP17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 OR1Q1Q15612 314 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 GALNTL5Q7Z4T8 443 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 ZNF605Q86T29 641 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 ZNF440Q8IYI8 595 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 C10orf67Q8IYJ2 551 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 OR2M7Q8NG81 312 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 OR5W2Q8NH69 310 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 GPR119Q8TDV5 335 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 ABHD17AQ96GS6 310 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 JSRP1Q96MG2 331 aaPredicted RBP17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 NPAS1Q99742 590 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 PRORYQ9H606 182 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 SDHAF3Q9NRP4 125 aa17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 TESQ9UGI8 421 aaKnown RBP17.29■□□□□ 0.36
CHMP4A-201ENST00000347519 MKRN2OSH3BPM6 223 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 HNRNPRO43390 633 aaKnown RBP17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 PEX1O43933 1283 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 CDC40O60508 579 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 SNX4O95219 450 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 BAG2O95816 211 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 LINGO3P0C6S8 592 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 ANPEPP15144 967 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 RHCEP18577 417 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 IDH2P48735 452 aaKnown RBP17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 IST1P53990 364 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 ZNF766Q5HY98 468 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 TIGD3Q6B0B8 471 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms