RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 RPS15P62841 145 aaKnown RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 RPP38P78345 283 aaKnown RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 SKP2Q13309 424 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 IL18R1Q13478 541 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 DNASE1L3Q13609 305 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 KEAP1Q14145 624 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 BTBD16Q32M84 506 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 ZNF691Q5VV52 312 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 NUP54Q7Z3B4 507 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 THAP5Q7Z6K1 395 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 MARCH9Q86YJ5 346 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 APLFQ8IW19 511 aaPredicted RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 RNF113BQ8IZP6 322 aaKnown RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 SLC15A4Q8N697 577 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 PHOSPHO1Q8TCT1 267 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 THAP3Q8WTV1 239 aaPredicted RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 FBLIM1Q8WUP2 373 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 ADAMTS14Q8WXS8 1223 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 HGDQ93099 445 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 GTPBP3Q969Y2 492 aaKnown RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 PITX2Q99697 317 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 YTHDF1Q9BYJ9 559 aaKnown RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 UCK2Q9BZX2 261 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 LAT2Q9GZY6 243 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 ZNF556Q9HAH1 456 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 ZBTB20Q9HC78 741 aaPredicted RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 PNPLA3Q9NST1 481 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 KIF17Q9P2E2 1029 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 SLC7A7Q9UM01 511 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 A0A1B0GWA3 101 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 TRIM64A6NGJ6 449 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 ZNF264O43296 627 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 KLF4O43474 513 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 EIF4E2O60573 245 aaKnown RBP10.06□□□□□ -0.8
ECM1-201ENST00000346569 RAD1O60671 282 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 NTN1O95631 604 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 OSMP13725 252 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 POU2F1P14859 743 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 HPGDP15428 266 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 ENDOUP21128 410 aaKnown RBP10.06□□□□□ -0.8
ECM1-201ENST00000346569 GSSP48637 474 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 CRISP1P54107 249 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 ESRRGP62508 458 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 IL1RL1Q01638 556 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 RAPSNQ13702 412 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 EFR3AQ14156 821 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 NDUFAF6Q330K2 333 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 LAIR2Q6ISS4 152 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 H3F3CQ6NXT2 135 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 IGF2-ASQ6U949 168 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 CBLN3Q6UW01 205 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 WDR88Q6ZMY6 472 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 MBOAT2Q6ZWT7 520 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 TMPRSS7Q7RTY8 843 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 MARCH3Q86UD3 253 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 DTX1Q86Y01 620 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 CCDC71Q8IV32 467 aaPredicted RBP10.06□□□□□ -0.8
ECM1-201ENST00000346569 GNPDA2Q8TDQ7 276 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 TTC9Q92623 222 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 ZNF524Q96C55 264 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 HS6ST2Q96MM7 605 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 ZNF426Q9BUY5 554 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 RIBC2Q9H4K1 309 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 ZNF696Q9H7X3 374 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 CARD8Q9Y2G2 431 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 HSPE1-MOB4S4R3N1 261 aa10.06□□□□□ -0.8
ECM1-201ENST00000346569 SPTBN2O15020 2390 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 FRYQ5TBA9 3013 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 AHCTF1Q8WYP5 2266 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 NSG1A0A0A6YYJ2 146 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 MED19A0JLT2 244 aaPredicted RBP10.05□□□□□ -0.8
ECM1-201ENST00000346569 H3BNH8 94 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 GTPBP1O00178 669 aaKnown RBP10.05□□□□□ -0.8
ECM1-201ENST00000346569 SLC30A4O14863 429 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 BCKDKO14874 412 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 CHP2O43745 196 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 CELA2AP08217 269 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 FBXO45P0C2W1 286 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 LINGO3P0C6S8 592 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 UBL4AP11441 157 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 ICAM2P13598 275 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 CHMP24386 653 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 CD82P27701 267 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 GGT2P36268 569 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 GAS1P54826 345 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 ALDH6A1Q02252 535 aaKnown RBP10.05□□□□□ -0.8
ECM1-201ENST00000346569 CD47Q08722 323 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 TSPAN31Q12999 210 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 NTRK2Q16620 822 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 KRT80Q6KB66 452 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 ULK3Q6PHR2 472 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 ZNF730Q6ZMV8 503 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 C8orf59Q8N0T1 100 aaPredicted RBP10.05□□□□□ -0.8
ECM1-201ENST00000346569 GATSQ8NAP1 163 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 GRHL3Q8TE85 626 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 TMEM255BQ8WV15 326 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 NKD1Q969G9 470 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 NTNG2Q96CW9 530 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 ARSGQ96EG1 525 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 MPP4Q96JB8 637 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms