RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ERVK-25P63136 954 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 HTD2P86397 168 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 ULBP3Q9BZM4 244 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 GCM1Q9NP62 436 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 C19orf12Q9NSK7 152 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 USP36Q9P275 1121 aaKnown RBP21.7■■□□□ 1.06
NPAS3-201ENST00000346562 TMEM189-UBE2V1I3L0A0 370 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 RAD1O60671 282 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 WDPCPO95876 746 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 RRADP55042 308 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 GK2Q14410 553 aaPredicted RBP21.7■■□□□ 1.06
NPAS3-201ENST00000346562 CCBE1Q6UXH8 406 aaPredicted RBP21.7■■□□□ 1.06
NPAS3-201ENST00000346562 STK35Q8TDR2 534 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 HLA-CQ95604 372 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 DCNP07585 359 aaKnown RBP21.7■■□□□ 1.06
NPAS3-201ENST00000346562 MFSD6LQ8IWD5 586 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 CYB561A3Q8NBI2 242 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 FNDC9Q8TBE3 224 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 SYNPRQ8TBG9 265 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 THSD1Q9NS62 852 aa21.7■■□□□ 1.06
NPAS3-201ENST00000346562 VSX1Q9NZR4 365 aaPredicted RBP21.7■■□□□ 1.06
NPAS3-201ENST00000346562 ZCWPW2A0A1B0GU75 182 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 SLC7A9P82251 487 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 PIP5KL1Q5T9C9 394 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 MEX3BQ6ZN04 569 aaKnown RBP21.69■■□□□ 1.06
NPAS3-201ENST00000346562 SERPINA11Q86U17 422 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 ZFAND1Q8TCF1 268 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 FGF13Q92913 245 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 PRRT1Q99946 306 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 BDKRB2P30411 391 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 PKLRP30613 574 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 AQP2P41181 271 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 MANEAQ5SRI9 462 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 FAM69AQ5T7M9 428 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 AGAP7PQ5VUJ5 663 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 AGAP6Q5VW22 663 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 EID2Q8N6I1 236 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 BPIFA2Q96DR5 249 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 AGAP4Q96P64 663 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 SLAMF7Q9NQ25 335 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 RICTORQ6R327 1708 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 BCAT2O15382 392 aaPredicted RBP21.69■■□□□ 1.06
NPAS3-201ENST00000346562 MRPL33O75394 65 aaKnown RBP21.69■■□□□ 1.06
NPAS3-201ENST00000346562 FGF4P08620 206 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 ACPPP15309 386 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 PROX2Q3B8N5 592 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 PPIL3Q9H2H8 161 aaKnown RBP21.69■■□□□ 1.06
NPAS3-201ENST00000346562 MROH6A6NGR9 719 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 GALR3O60755 368 aaPredicted RBP21.69■■□□□ 1.06
NPAS3-201ENST00000346562 SLC22A5O76082 557 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 CPOXP36551 454 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 CD79BP40259 229 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 ASB17Q8WXJ9 295 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 INPP5EQ9NRR6 644 aa21.69■■□□□ 1.06
NPAS3-201ENST00000346562 A0A1W2PQL4 384 aaPredicted RBP21.68■■□□□ 1.06
NPAS3-201ENST00000346562 APOC3P02656 99 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 GABRA2P47869 451 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 PM20D2Q8IYS1 436 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 TAAR2Q9P1P5 351 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 ZNF223Q9UK11 482 aaPredicted RBP21.68■■□□□ 1.06
NPAS3-201ENST00000346562 ZNF44P15621 663 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 BPHLQ86WA6 291 aaPredicted RBP21.68■■□□□ 1.06
NPAS3-201ENST00000346562 PTERQ96BW5 349 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 RNF212BA8MTL3 300 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 G3V2L1 256 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 LYRM1O43325 122 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 CNMDO75829 334 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 COL9A2Q14055 689 aaPredicted RBP21.68■■□□□ 1.06
NPAS3-201ENST00000346562 GDPGP1Q6ZNW5 385 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 IL17RDQ8NFM7 739 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 CNTNAP3BQ96NU0 1288 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 ZNF300Q96RE9 604 aaPredicted RBP21.68■■□□□ 1.06
NPAS3-201ENST00000346562 SORBS1Q9BX66 1292 aaKnown RBP21.68■■□□□ 1.06
NPAS3-201ENST00000346562 UBQLN4Q9NRR5 601 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 DVL2O14641 736 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 SSX4O60224 188 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 BMP2P12643 396 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 ETV5P41161 510 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 KIF18BQ86Y91 864 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 FAM217AQ8IXS0 508 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 PAQR5Q9NXK6 330 aaPredicted RBP21.68■■□□□ 1.06
NPAS3-201ENST00000346562 KLHL42Q9P2K6 505 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 NLKQ9UBE8 527 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 CACNG2Q9Y698 323 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 CSNK1G3Q9Y6M4 447 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 NME4O00746 187 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 PRAF2O60831 178 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 HMGN2P05204 90 aaKnown RBP21.68■■□□□ 1.06
NPAS3-201ENST00000346562 DCTP40126 519 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 SBSNQ6UWP8 590 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 GRAMD2AQ8IUY3 354 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 OR13J1Q8NGT2 312 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 NICN1Q9BSH3 213 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 HIF1ANQ9NWT6 349 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 AK6Q9Y3D8 172 aaKnown RBP21.68■■□□□ 1.06
NPAS3-201ENST00000346562 PCDHGA7Q9Y5G6 932 aa21.68■■□□□ 1.06
NPAS3-201ENST00000346562 STK17BO94768 372 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 CBX7O95931 251 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 GAAP10253 952 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 CPMP14384 443 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms