RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 PIGQQ9BRB3 760 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 CPPED1Q9BRF8 314 aaPredicted RBP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 CHRDQ9H2X0 955 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 BAIAP2Q9UQB8 552 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 HS3ST2Q9Y278 367 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 RNF215Q9Y6U7 377 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 J3QLW9 94 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 M0R3H8 397 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 PCDH17O14917 1159 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 ORC5O43913 435 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 PAHP00439 452 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 FUCA1P04066 466 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF19P17023 458 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 IDUAP35475 653 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 SLC1A3P43003 542 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 DCDC1P59894 354 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 SELENOWP63302 87 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 TRIP6Q15654 476 aaKnown RBP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF181Q2M3W8 571 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 CTU2Q2VPK5 515 aaKnown RBP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 ADAMTSL4Q6UY14 1074 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 ARMC10Q8N2F6 343 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 MUL1Q969V5 352 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 MARCH5Q9NX47 278 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 KLHL42Q9P2K6 505 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 TNFRSF10AO00220 468 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 GFRA3O60609 400 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 MT-CO3P00414 261 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 IGLV3-25P01717 112 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 CRYBA1P05813 215 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 CBLP22681 906 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 GNG2P59768 71 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 EIF5AP63241 154 aaKnown RBP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 ADARB1P78563 741 aaKnown RBP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 TRA2AQ13595 282 aaKnown RBP eCLIP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 ZMAT1Q5H9K5 638 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 CPZQ66K79 652 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 PTRH1Q86Y79 214 aaKnown RBP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 SLITRK4Q8IW52 837 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 OR4N5Q8IXE1 308 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 MMP21Q8N119 569 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 OR8H3Q8N146 312 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 AMBRA1Q9C0C7 1298 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 NELFAQ9H3P2 528 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 KLHL21Q9UJP4 597 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 NAALAD2Q9Y3Q0 740 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 TRAV6A0A075B6T7 132 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 A0A1B0GX78 115 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 CD8B2A6NJW9 211 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 FRS3O43559 492 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 B4GALT3O60512 393 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 UGDHO60701 494 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 DNAJB5O75953 348 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 CD8BP10966 210 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 PRKCAP17252 672 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 HLA-FP30511 346 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 PCBP4P57723 403 aaKnown RBP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 MICAQ29983 383 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 KIF18BQ86Y91 864 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 LILRA3Q8N6C8 439 aaPredicted RBP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 OR13H1Q8NG92 308 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 OR5T2Q8NGG2 359 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 LRRC20Q8TCA0 184 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 SLC5A7Q9GZV3 580 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 MTHFD2LQ9H903 347 aaPredicted RBP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 PFDN2Q9UHV9 154 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 SARDHQ9UL12 918 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 MGAT4BQ9UQ53 548 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 CD3GP09693 182 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 AOAHP28039 575 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 CRABP1P29762 137 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 RUNX2Q13950 521 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 PAPD4Q6PIY7 484 aaKnown RBP10.19□□□□□ -0.78
CLCN6-202ENST00000346436 SPATC1Q76KD6 591 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 BTLAQ7Z6A9 289 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 EXD3Q8N9H8 876 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 OR2T4Q8NH00 348 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 MMP28Q9H239 520 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 SEMA6CQ9H3T2 930 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 PAQR5Q9NXK6 330 aaPredicted RBP10.19□□□□□ -0.78
CLCN6-202ENST00000346436 KLHL13Q9P2N7 655 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 PRLP01236 227 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 CAMK2DQ13557 499 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 ERV3-1Q14264 604 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 TMEM52BQ4KMG9 183 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 XKR7Q5GH72 579 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 Q7L0L9 218 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 LINGO2Q7L985 606 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 KMT5CQ86Y97 462 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 OR5D16Q8NGK9 328 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 HMGCLL1Q8TB92 370 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 CHFRQ96EP1 664 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 DNAJA3Q96EY1 480 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF385DQ9H6B1 395 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 PCDHGB6Q9Y5F9 930 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 COL11A2P13942 1736 aaPredicted RBP10.19□□□□□ -0.78
CLCN6-202ENST00000346436 IGLV3-10A0A075B6K4 115 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 DVL2O14641 736 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 ALDOBP05062 364 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms