RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ADAMTS18Q8TE60 1221 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 HOXB13Q92826 284 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 ISOC1Q96CN7 298 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 SLC41A2Q96JW4 573 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 MCHR1Q99705 422 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 CNPPD1Q9BV87 410 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 DGCR6LQ9BY27 220 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 TRIM45Q9H8W5 580 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 LANCL2Q9NS86 450 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 KLHL28Q9NXS3 571 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 SCN3BQ9NY72 215 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 NLGN3Q9NZ94 848 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 ERVK-19Q9WJR5 959 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 HEMK1Q9Y5R4 338 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 SNX5Q9Y5X3 404 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 U3KQA8 63 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 HEATR5AQ86XA9 2040 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 A0A087WUU8 490 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 CPED1A4D0V7 1026 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 BLACEA4D250 179 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 SIGLEC6O43699 453 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 BRINP1O60477 761 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 SEC14L2O76054 403 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 IGKV1D-16P01601 117 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 MT-ND2P03891 347 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 IFNA16P05015 189 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 GKN3PP0CG01 181 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 PTNP21246 168 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 CNR2P34972 360 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF136P52737 540 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 EMX1Q04741 257 aaPredicted RBP8.53□□□□□ -1.04
ATG4A-202ENST00000345734 SIGLEC14Q08ET2 396 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 ILKQ13418 452 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 NNATQ16517 81 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 MRPL2Q5T653 305 aaKnown RBP8.53□□□□□ -1.04
ATG4A-202ENST00000345734 C6orf183Q5T699 404 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 LCE2AQ5TA79 106 aaPredicted RBP8.53□□□□□ -1.04
ATG4A-202ENST00000345734 GTF2IRD2BQ6EKJ0 949 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 CDPF1Q6NVV7 123 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 WDR74Q6RFH5 385 aaPredicted RBP8.53□□□□□ -1.04
ATG4A-202ENST00000345734 NPSR1Q6W5P4 371 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF574Q6ZN55 896 aaPredicted RBP8.53□□□□□ -1.04
ATG4A-202ENST00000345734 PLEKHM3Q6ZWE6 761 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 AHSA2Q719I0 299 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 CDH24Q86UP0 819 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 GTF2IRD2Q86UP8 949 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 P3H2Q8IVL5 708 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 NKAIN4Q8IVV8 208 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 OR7G1Q8NGA0 311 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 SAP25Q8TEE9 199 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 VSTM2LQ96N03 204 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 CDC6Q99741 560 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 LMF2Q9BU23 707 aaKnown RBP8.53□□□□□ -1.04
ATG4A-202ENST00000345734 POLR2J3Q9H1A7 115 aaKnown RBP8.53□□□□□ -1.04
ATG4A-202ENST00000345734 C12orf10Q9HB07 376 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 CACYBPQ9HB71 228 aaKnown RBP8.53□□□□□ -1.04
ATG4A-202ENST00000345734 IMPAD1Q9NX62 359 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 SEMA5BQ9P283 1151 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 NUP210LQ5VU65 1888 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 NOTOA8MTQ0 251 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 F8W735 103 aaPredicted RBP8.53□□□□□ -1.04
ATG4A-202ENST00000345734 H3BN98 237 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 TMX2-CTNND1H3BSU7 103 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 AP3D1O14617 1153 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 GNB5O14775 395 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 PRKNO60260 465 aaPredicted RBP8.53□□□□□ -1.04
ATG4A-202ENST00000345734 CLPSP04118 112 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 CFIP05156 583 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 DBIP07108 87 aaKnown RBP8.53□□□□□ -1.04
ATG4A-202ENST00000345734 TNNI3P19429 210 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 MASP1P48740 699 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 BCAP31P51572 246 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 EFNA3P52797 238 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 HSD17B7P56937 341 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 CDC42P60953 191 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 TRAM2Q15035 370 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 C1orf189Q5VU69 101 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 C1orf94Q6P1W5 598 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 GDF7Q7Z4P5 450 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 PRSS42Q7Z5A4 293 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 C1orf210Q8IVY1 113 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 CARFQ8N187 725 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 IQCF1Q8N6M8 205 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 FAR1Q8WVX9 515 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 EDAQ92838 391 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 TSLPQ969D9 159 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 MUL1Q969V5 352 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 C12orf43Q96C57 262 aaKnown RBP8.53□□□□□ -1.04
ATG4A-202ENST00000345734 CNDP2Q96KP4 475 aaKnown RBP8.53□□□□□ -1.04
ATG4A-202ENST00000345734 PTCHD1Q96NR3 888 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 TUBA1CQ9BQE3 449 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 ENOPH1Q9UHY7 261 aa8.53□□□□□ -1.04
ATG4A-202ENST00000345734 FUOMA2VDF0 154 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 ANKRD34BA5PLL1 514 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 A8MUA0 341 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 PATE3B3GLJ2 98 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 SHOXO15266 292 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 MAGEB3O15480 346 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 RGS10O43665 173 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 PEX14O75381 377 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms