RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 EIF2B1Q14232 305 aaKnown RBP11.39□□□□□ -0.59
COL12A1-202ENST00000345356 FXNQ16595 210 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 CTF1Q16619 201 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 FIGNL1Q6PIW4 674 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 TEX261Q6UWH6 196 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 CRYGNQ8WXF5 182 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 TEX37Q96LM6 180 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 SAMD10Q9BYL1 202 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 INPP5EQ9NRR6 644 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 SERINC1Q9NRX5 453 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF629Q9UEG4 869 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-202ENST00000345356 U3KQ87 197 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 MON2Q7Z3U7 1717 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 MEGF11A6BM72 1044 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 ASGR2P07307 311 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 SEC61A1P61619 476 aaKnown RBP11.39□□□□□ -0.59
COL12A1-202ENST00000345356 ARHGAP12Q8IWW6 846 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 CPA6Q8N4T0 437 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF587Q96SQ5 575 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-202ENST00000345356 TMEM175Q9BSA9 504 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 TMEM43Q9BTV4 400 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 PCYT1BQ9Y5K3 369 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-202ENST00000345356 TNFRSF10BO14763 440 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 CLDN12P56749 244 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 GPLD1P80108 840 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 CHRNEQ04844 493 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 TMEM88Q6PEY1 159 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 PIANPQ8IYJ0 282 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 SDR9C7Q8NEX9 313 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 OR52I1Q8NGK6 324 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 DOK4Q8TEW6 326 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 JSRP1Q96MG2 331 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF559Q9BR84 538 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 GMEB2Q9UKD1 530 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF195O14628 629 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 B4GALT2O60909 372 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 PFKMP08237 780 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 CSF3P09919 207 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 TAS2R20P59543 309 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 HSD11B2P80365 405 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 TXNDC8Q6A555 127 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 SLC18B1Q6NT16 456 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 TOMM40LQ969M1 308 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 BRF2Q9HAW0 419 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 SLC6A20Q9NP91 592 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 TRDV1A0A1B0GX56 115 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF860A6NHJ4 632 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 GPR32O75388 356 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 MSR1P21757 451 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 ACTR1BP42025 376 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 ACTR1AP61163 376 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 TDGQ13569 410 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 ANKRD34AQ69YU3 496 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 VITQ6UXI7 678 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 LRRC25Q8N386 305 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-202ENST00000345356 OR5M3Q8NGP4 307 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 MTHFD2LQ9H903 347 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-202ENST00000345356 SAGE1Q9NXZ1 904 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 SLC23A1Q9UHI7 598 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 CAMK2AQ9UQM7 478 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 FGF19O95750 216 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 NAA40Q86UY6 237 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 GLCCI1Q86VQ1 547 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 NPLOC4Q8TAT6 608 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 SYT3Q9BQG1 590 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 PURGQ9UJV8 347 aaKnown RBP11.38□□□□□ -0.59
COL12A1-202ENST00000345356 KCNK6Q9Y257 313 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 LRIT2A6NDA9 550 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 KCNJ13O60928 360 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 NDUFB2O95178 105 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 RHOP08100 348 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 HOXB5P09067 269 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 BPIP17213 487 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF136P52737 540 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 CMTM8Q8IZV2 173 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 GIMAP5Q96F15 307 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 SLC38A3Q99624 504 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 C1QTNF2Q9BXJ5 285 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 TUBB1Q9H4B7 451 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 EVA1BQ9NVM1 165 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 RNF215Q9Y6U7 377 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 MN1Q10571 1320 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-202ENST00000345356 LMO7Q8WWI1 1683 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 SLC16A8O95907 504 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 TPOP07202 933 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 GIPP09681 153 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-202ENST00000345356 CLDN20P56880 219 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 HOXC5Q00444 222 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 EBPQ15125 230 aaKnown RBP11.38□□□□□ -0.59
COL12A1-202ENST00000345356 OR4C11Q6IEV9 310 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 ALKBH2Q6NS38 261 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 C1orf94Q6P1W5 598 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 RNF111Q6ZNA4 994 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 LIX1LQ8IVB5 337 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 SLC30A7Q8NEW0 376 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 POC1BQ8TC44 478 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 FAM86C1Q9NVL1 165 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 NDRG3Q9UGV2 375 aa11.38□□□□□ -0.59
COL12A1-202ENST00000345356 EOMESO95936 686 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 SSTP61278 116 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms