RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 OR52J3Q8NH60 311 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PACRGQ96M98 296 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PIGQQ9BRB3 760 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ACTR3CQ9C0K3 210 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 OR51B4Q9Y5P0 310 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 FAM74A7A6NL05 159 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ADAMTS3O15072 1205 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ARSBP15848 533 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ASCL1P50553 236 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 RANBP3LQ86VV4 465 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 OR4B1Q8NGF8 309 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 DVL3Q92997 716 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 CRB3Q9BUF7 120 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 OSGEPL1Q9H4B0 414 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 GJB4Q9NTQ9 266 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 RLIMQ9NVW2 624 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 MARCH5Q9NX47 278 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 LIASO43766 372 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PDE6DO43924 150 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 GUSBP08236 651 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 CNR1P21554 472 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 CPT2P23786 658 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 GRK6P43250 576 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 SPIN4Q56A73 249 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 RPL7L1Q6DKI1 246 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 DET1Q7L5Y6 550 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 MILR1Q7Z6M3 343 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 FOXJ1Q92949 421 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 RTP4Q96DX8 246 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ZFP3Q96NJ6 502 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ACOX2Q99424 681 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ZFYVE21Q9BQ24 234 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 POFUT1Q9H488 388 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 EVA1AQ9H8M9 152 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 LSM5Q9Y4Y9 91 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 RAI2Q9Y5P3 530 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 GH2P01242 217 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 FGF4P08620 206 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 RAB40ALP0C0E4 278 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SPIN3Q5JUX0 258 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ZFP62Q8NB50 900 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OR13C5Q8NGS8 318 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 RAB40AQ8WXH6 277 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM176AQ96HP8 235 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 PRDM12Q9H4Q4 367 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TAF9BQ9HBM6 251 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 HSPB8Q9UJY1 196 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 POMT2Q9UKY4 750 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SETD1AO15047 1707 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TBL1XO60907 577 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 JAM2P57087 298 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ZP2Q05996 745 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 HABP2Q14520 560 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SLC36A2Q495M3 483 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 HES3Q5TGS1 186 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OPN5Q6U736 354 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM169Q96HH4 297 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 RHCGQ9UBD6 479 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CPA4Q9UI42 421 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 PIAS3Q9Y6X2 628 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 A0A1W2PP18 115 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 GRAP2O75791 330 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OPCMLQ14982 345 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TTC32Q5I0X7 151 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 FAM71CQ8NEG0 241 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ZMIZ2Q8NF64 920 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ORAOV1Q8WV07 137 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 KCNE4Q8WWG9 221 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 METTL21AQ8WXB1 218 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 LPAR1Q92633 364 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SLC22A23A1A5C7 686 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ALPLP05186 524 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OR8U8P0C7N1 319 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 FGF9P31371 208 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 UBE2MP61081 183 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 FAM58AQ8N1B3 248 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OR8U1Q8NH10 309 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 DNASE1L2Q92874 299 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM231Q9H6L2 316 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CAMK2AQ9UQM7 478 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 A8MVM7 634 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 UTS2O95399 124 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 LPOP22079 712 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CD82P27701 267 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 PCSK1P29120 753 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM97Q5BJF2 176 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM81Q6P7N7 255 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TRMT11Q7Z4G4 463 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 PIM3Q86V86 326 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 NRMQ8IXM6 262 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CANT1Q8WVQ1 401 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 PCDHGA7Q9Y5G6 932 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF816-ZNF321PA0A0X1KG74 233 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 NPIPB9F8W1W9 429 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CTDSP2O14595 271 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CYC1P08574 325 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 AKR1A1P14550 325 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SLC11A1P49279 550 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CCL15Q16663 113 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms