RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 SLC39A5Q6ZMH5 540 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 FCRLAQ7L513 359 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 ZDHHC5Q9C0B5 715 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 FN3KQ9H479 309 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 HINT3Q9NQE9 182 aaKnown RBP11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 C14orf105Q9NVL8 296 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 OR2AT4A6NND4 320 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 RFXAPO00287 272 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 DOK2O60496 412 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 CREBL2O60519 120 aaPredicted RBP11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 HOXB2P14652 356 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 CCR2P41597 374 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 TMEM35AQ53FP2 167 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 OTPQ5XKR4 325 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 ARL14Q8N4G2 192 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 MS4A15Q8N5U1 240 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 SIMC1Q8NDZ2 872 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 DNAJA4Q8WW22 397 aaPredicted RBP11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 TNFRSF13CQ96RJ3 184 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 KCNE3Q9Y6H6 103 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 TRAV18A0A075B6X5 111 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 KCNE1BA0A087WTH5 132 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 CARNS1A5YM72 827 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 RNF13O43567 381 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 KRT33AO76009 404 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 CHRM4P08173 479 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 SPARCP09486 303 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 SNRPGP62308 76 aaKnown RBP11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 BTN1A1Q13410 526 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 LEG1Q6P5S2 330 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 RFPL4BQ6ZWI9 263 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 KRT77Q7Z794 578 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 ABI3BPQ7Z7G0 1075 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 ZDHHC1Q8WTX9 485 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 NXPE3Q969Y0 559 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 NXPE2Q96DL1 559 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 PEX11GQ96HA9 241 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 DGAT2Q96PD7 388 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 ATG5Q9H1Y0 275 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 UBQLN3Q9H347 655 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 TMEM185BQ9H7F4 350 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 ISG20L2Q9H9L3 353 aaKnown RBP11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 IL21Q9HBE4 155 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 SIDT1Q9NXL6 827 aaKnown RBP11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 GRHPRQ9UBQ7 328 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 PRKNO60260 465 aaPredicted RBP11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 CXCR1P25024 350 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 GPR176Q14439 515 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 GARNL3Q5VVW2 1013 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 LRFN4Q6PJG9 635 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 SIAH3Q8IW03 269 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 GALNT11Q8NCW6 608 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 ALG14Q96F25 216 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 NDUFB11Q9NX14 153 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 MSRAQ9UJ68 235 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 LY75O60449 1722 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 TRIM3O75382 744 aaPredicted RBP11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 RENP00797 406 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 CTSLP07711 333 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 ITGB8P26012 769 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 PTPN6P29350 595 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 CEBPGP53567 150 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 SMAD2Q15796 467 aaKnown RBP11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 NKPD1Q17RQ9 610 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 BEX5Q5H9J7 111 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 SFXN4Q6P4A7 337 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 LRRN1Q6UXK5 716 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 MEPCEQ7L2J0 689 aaKnown RBP11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 ADIPOR2Q86V24 386 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 LRRC28Q86X40 367 aaPredicted RBP11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 TMEM99Q8N816 258 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 GPR32P1Q8NGA4 272 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 BADQ92934 168 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 MMABQ96EY8 250 aaPredicted RBP11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 LYSMD1Q96S90 227 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 CNN2Q99439 309 aaKnown RBP11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 TAS2R3Q9NYW6 316 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 MLXQ9UH92 298 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 HCFC2Q9Y5Z7 792 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 OR14I1A6ND48 311 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 CASC3O15234 703 aaKnown RBP11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 ALX3O95076 343 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 UCHL1P09936 223 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 ZNF823P16415 610 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 ATP5A1P25705 553 aaKnown RBP11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 CST5P28325 142 aaPredicted RBP11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 OR1Q1Q15612 314 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 OR5K2Q8NHB8 316 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 THAP3Q8WTV1 239 aaPredicted RBP11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 METTL21AQ8WXB1 218 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 OR2M4Q96R27 311 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 OR14A2Q96R54 314 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 SLC17A9Q9BYT1 436 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 SLAMF7Q9NQ25 335 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 OR2S2Q9NQN1 319 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 NUP50Q9UKX7 468 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 MYOFQ9NZM1 2061 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 HCRTR2O43614 444 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 CLEC3AO75596 197 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 ITGB7P26010 798 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms