RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 PABPC4LP0CB38 370 aaKnown RBP9.41□□□□□ -0.9
ATXN3-201ENST00000340660 PPIAL4FP0DN26 164 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 CDKN2BP42772 138 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 FOXG1P55316 489 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-201ENST00000340660 HNRNPH2P55795 449 aaKnown RBP9.41□□□□□ -0.9
ATXN3-201ENST00000340660 CORO7P57737 925 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 RAB10P61026 200 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 ZNF154Q13106 437 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 GABRA6Q16445 453 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 GLYR1Q49A26 553 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-201ENST00000340660 C18orf63Q68DL7 685 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 Q6YL49 198 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 SPATA21Q7Z572 469 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 WDR75Q8IWA0 830 aaKnown RBP9.41□□□□□ -0.9
ATXN3-201ENST00000340660 LYG1Q8N1E2 194 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 PARP8Q8N3A8 854 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 GLB1L3Q8NCI6 653 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-201ENST00000340660 OR4S1Q8NGB4 309 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 TMBIM1Q969X1 311 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 MUS81Q96NY9 551 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 NAP1L3Q99457 506 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-201ENST00000340660 ASCL2Q99929 193 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 LRRC40Q9H9A6 602 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 LEF1Q9UJU2 399 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-201ENST00000340660 PURGQ9UJV8 347 aaKnown RBP9.41□□□□□ -0.9
ATXN3-201ENST00000340660 CRYL1Q9Y2S2 319 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 MED16Q9Y2X0 877 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 C9JVG2 144 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 RTCAO00442 366 aaKnown RBP9.4□□□□□ -0.9
ATXN3-201ENST00000340660 SCO2O43819 266 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 GPR137BO60478 399 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 KERAO60938 352 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 PRKD3O94806 890 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 IGHV3-9P01782 118 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 CDH2P19022 906 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-201ENST00000340660 ENPP1P22413 925 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 ATP5A1P25705 553 aaKnown RBP9.4□□□□□ -0.9
ATXN3-201ENST00000340660 GALNSP34059 522 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 RPL4P36578 427 aaKnown RBP9.4□□□□□ -0.9
ATXN3-201ENST00000340660 FEN1P39748 380 aaKnown RBP9.4□□□□□ -0.9
ATXN3-201ENST00000340660 SLMAPQ14BN4 828 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 UGT3A1Q6NUS8 523 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 ESPNLQ6ZVH7 1005 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 MPP5Q8N3R9 675 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 TMEM86BQ8N661 226 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 ACOT4Q8N9L9 421 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 CKAP2Q8WWK9 683 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 DYRK2Q92630 601 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 TANKQ92844 425 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 LRRC45Q96CN5 670 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 SLC35A4Q96G79 324 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 ADOQ96SZ5 270 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 RTN4RQ9BZR6 473 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 TMEM185BQ9H7F4 350 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 OXSMQ9NWU1 459 aa9.4□□□□□ -0.9
ATXN3-201ENST00000340660 IGHV1-18A0A0C4DH31 117 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 E5RI56 91 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 H7C0C1 242 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 ACOX3O15254 700 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 NCR1O76036 304 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 TCN1P20061 433 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-201ENST00000340660 S1PR1P21453 382 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 THBS4P35443 961 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 ATP5OP48047 213 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 EGFEM1PQ0D2K5 195 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 SP140Q13342 867 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 TFDP2Q14188 446 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 TCEAL1Q15170 157 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 TTLL9Q3SXZ7 439 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 DUPD1Q68J44 220 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 NEPROQ6NW34 567 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 ZNF771Q7L3S4 317 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-201ENST00000340660 FCRLAQ7L513 359 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 CFHR4Q92496 578 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 KCNJ9Q92806 393 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 VPS39Q96JC1 886 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 PPP1R2P1Q96PQ5 205 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 F2RL3Q96RI0 385 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 NDNQ99608 321 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 ZNF416Q9BWM5 594 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 TRIM54Q9BYV2 358 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 BCO1Q9HAY6 547 aa9.39□□□□□ -0.91
ATXN3-201ENST00000340660 MGRN1O60291 552 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 METTL18O95568 372 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 GPR75O95800 540 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 MELTFP08582 738 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 NPR2P20594 1047 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 LMO1P25800 156 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 SHC1P29353 583 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 CARD18P57730 90 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 STX5Q13190 355 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 CPNE9Q8IYJ1 553 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 WFDC9Q8NEX5 89 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 OR52E2Q8NGJ4 325 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 ANKRD7Q92527 254 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 REXO5Q96IC2 774 aaKnown RBP9.38□□□□□ -0.91
ATXN3-201ENST00000340660 PSD2Q9BQI7 771 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 PARVBQ9HBI1 364 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 SLC17A5Q9NRA2 495 aa9.38□□□□□ -0.91
ATXN3-201ENST00000340660 KMT2AQ03164 3969 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms