RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 PRAMEF2O60811 474 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 CLUP10909 449 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 SLC9A3P48764 834 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 HSD17B7P56937 341 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 TEKQ02763 1124 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 FUT7Q11130 342 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 SPHARQ15513 63 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 CD226Q15762 336 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 LPAL2Q16609 132 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 PLXDC1Q8IUK5 500 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 LINC00471Q8N535 108 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 FCGR1BQ92637 280 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 ERGIC3Q9Y282 383 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 MED12Q93074 2177 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 FITM1A5D6W6 292 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 DSCR3O14972 297 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 CCR4P51679 360 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 NR1D2Q14995 579 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 PGGHGQ32M88 737 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 ALG10BQ5I7T1 473 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 GARNL3Q5VVW2 1013 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 PLBD1Q6P4A8 553 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 CYP4Z2PQ8N1L4 340 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 TM9SF4Q92544 642 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 HOXB13Q92826 284 aaPredicted RBP14.24□□□□□ -0.13
MBD1-203ENST00000339998 TBX5Q99593 518 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 TESQ9UGI8 421 aaKnown RBP14.24□□□□□ -0.13
MBD1-203ENST00000339998 WISP1O95388 367 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 GYPBP06028 91 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 CSTF2P33240 577 aaKnown RBP eCLIP14.23□□□□□ -0.13
MBD1-203ENST00000339998 SERPINB10P48595 397 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 SKP1P63208 163 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 TMED1Q13445 227 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 NSDHLQ15738 373 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 C16orf87Q6PH81 154 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 GPR135Q8IZ08 494 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 TMCO5AQ8N6Q1 288 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 FANK1Q8TC84 345 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 PLEKHA8Q96JA3 519 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 TNFRSF13CQ96RJ3 184 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 SMOC1Q9H4F8 434 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 MKL2Q9ULH7 1088 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 CACNA1CQ13936 2221 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 A0A0B4J2E0 115 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 A0A1B0GX12 115 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 UNC119BA6NIH7 251 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 CSTAP01040 98 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 CFIP05156 583 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 RPLP0P05388 317 aaKnown RBP14.23□□□□□ -0.13
MBD1-203ENST00000339998 TBXA2RP21731 343 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 CDH11P55287 796 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 ITGADQ13349 1161 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 ADOQ96SZ5 270 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 C6orf62Q9GZU0 229 aaPredicted RBP14.23□□□□□ -0.13
MBD1-203ENST00000339998 TMEM27Q9HBJ8 222 aa14.23□□□□□ -0.13
MBD1-203ENST00000339998 A0A1W2PQM1 296 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 H0YIG0 161 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 IMPA2O14732 288 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 SIGLEC6O43699 453 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 LALBAP00709 142 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 BMP4P12644 408 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 NOS3P29474 1203 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 STAT5AP42229 794 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 MTNR1AP48039 350 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 ARRB1P49407 418 aaPredicted RBP14.22□□□□□ -0.13
MBD1-203ENST00000339998 SLC37A1P57057 533 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 CRYZQ08257 329 aaKnown RBP14.22□□□□□ -0.13
MBD1-203ENST00000339998 ZNF829Q3KNS6 432 aaPredicted RBP14.22□□□□□ -0.13
MBD1-203ENST00000339998 ARHGAP40Q5TG30 622 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 NANOGP1Q8N7R0 232 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 ART5Q96L15 291 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 SLC38A2Q96QD8 506 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 CD180Q99467 661 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 NDC1Q9BTX1 674 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 ANKRD19PQ9H560 264 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 CDH10Q9Y6N8 788 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 PRODHO43272 600 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 PSMD7P51665 324 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 EPHA4P54764 986 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 NCF4Q15080 339 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 KIF26BQ2KJY2 2108 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 ZNF367Q7RTV3 350 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 D2HGDHQ8N465 521 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 OR2T33Q8NG76 320 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 OSTF1Q92882 214 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 NUDT9Q9BW91 350 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 TPK1Q9H3S4 243 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 TOR4AQ9NXH8 423 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 OSGIN1Q9UJX0 560 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 PCDHGA3Q9Y5H0 932 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 NPIPB9F8W1W9 429 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 CCRL2O00421 344 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 MYL12BO14950 172 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 AK1P00568 194 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 PIPP12273 146 aaPredicted RBP14.22□□□□□ -0.13
MBD1-203ENST00000339998 SLC16A1P53985 500 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 ATP1A4Q13733 1029 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 INSL4Q14641 139 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 DGUOKQ16854 277 aa14.22□□□□□ -0.13
MBD1-203ENST00000339998 HLA-BQ31612 363 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms