RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CSTF1Q05048 431 aaKnown RBP15.12■□□□□ 0.01
LITAF-201ENST00000339430 PDZK1Q5T2W1 519 aa15.12■□□□□ 0.01
LITAF-201ENST00000339430 ZC3H14Q6PJT7 736 aaKnown RBP15.12■□□□□ 0.01
LITAF-201ENST00000339430 RANBP3LQ86VV4 465 aaPredicted RBP15.12■□□□□ 0.01
LITAF-201ENST00000339430 MAML2Q8IZL2 1156 aaPredicted RBP15.12■□□□□ 0.01
LITAF-201ENST00000339430 ZNF619Q8N2I2 560 aa15.12■□□□□ 0.01
LITAF-201ENST00000339430 KLHL36Q8N4N3 616 aa15.12■□□□□ 0.01
LITAF-201ENST00000339430 NLGN4YQ8NFZ3 816 aaPredicted RBP15.12■□□□□ 0.01
LITAF-201ENST00000339430 SETD6Q8TBK2 473 aa15.12■□□□□ 0.01
LITAF-201ENST00000339430 DNASE2BQ8WZ79 361 aa15.12■□□□□ 0.01
LITAF-201ENST00000339430 RERGQ96A58 199 aaPredicted RBP15.12■□□□□ 0.01
LITAF-201ENST00000339430 ZFYVE21Q9BQ24 234 aa15.12■□□□□ 0.01
LITAF-201ENST00000339430 ZNF649Q9BS31 505 aa15.12■□□□□ 0.01
LITAF-201ENST00000339430 HOXD1Q9GZZ0 328 aa15.12■□□□□ 0.01
LITAF-201ENST00000339430 OR52D1Q9H346 318 aa15.12■□□□□ 0.01
LITAF-201ENST00000339430 ISG20L2Q9H9L3 353 aaKnown RBP15.12■□□□□ 0.01
LITAF-201ENST00000339430 ISYNA1Q9NPH2 558 aa15.12■□□□□ 0.01
LITAF-201ENST00000339430 PILRAQ9UKJ1 303 aa15.12■□□□□ 0.01
LITAF-201ENST00000339430 THADAQ6YHU6 1953 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 C2orf92A0A1B0GVN3 265 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 SHISA3A0PJX4 238 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 TNFSF14O43557 240 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 CSF3P09919 207 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 CT62P0C5K7 136 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 IFI30P13284 250 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 HTR1FP30939 366 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 FXYD6P3P58550 94 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 PPP1CAP62136 330 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 GPR50Q13585 617 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 OR1Q1Q15612 314 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 PYDC2Q56P42 97 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 WDR45BQ5MNZ6 344 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 FHL5Q5TD97 284 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 ZNF517Q6ZMY9 492 aaPredicted RBP15.11■□□□□ 0.01
LITAF-201ENST00000339430 MARCH9Q86YJ5 346 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 C1orf210Q8IVY1 113 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 SAMD14Q8IZD0 417 aaPredicted RBP15.11■□□□□ 0.01
LITAF-201ENST00000339430 FANK1Q8TC84 345 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 LRRC61Q9BV99 259 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 ZNF350Q9GZX5 532 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 TNFRSF10DQ9UBN6 386 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 C19orf53Q9UNZ5 99 aaPredicted RBP15.11■□□□□ 0.01
LITAF-201ENST00000339430 PCDHGB2Q9Y5G2 931 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 TTC28Q96AY4 2481 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 GXYLT2A0PJZ3 443 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 TRAPPC13A5PLN9 417 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 UNC119BA6NIH7 251 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 A8MV72 311 aaPredicted RBP15.11■□□□□ 0.01
LITAF-201ENST00000339430 STX11O75558 287 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 EIPR1Q53HC9 387 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 FCRLBQ6BAA4 426 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 UBQLNLQ8IYU4 475 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 TMEM105Q8N8V8 129 aa15.11■□□□□ 0.01
LITAF-201ENST00000339430 EXOGQ9Y2C4 368 aaKnown RBP15.11■□□□□ 0.01
LITAF-201ENST00000339430 GABRPO00591 440 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 BCAT2O15382 392 aaPredicted RBP15.1■□□□□ 0.01
LITAF-201ENST00000339430 AKAP8O43823 692 aaKnown RBP15.1■□□□□ 0.01
LITAF-201ENST00000339430 CSF2P04141 144 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 HTR3AP46098 478 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 SCN1BQ07699 218 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 XKRXQ6PP77 449 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 ZNF614Q8N883 585 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 ATP6V1C2Q8NEY4 427 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 TMEM239Q8WW34 195 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 MED18Q9BUE0 208 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 HCAR1Q9BXC0 346 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 MED17Q9NVC6 651 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 SIDT1Q9NXL6 827 aaKnown RBP15.1■□□□□ 0.01
LITAF-201ENST00000339430 TRDV1A0A1B0GX56 115 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 HTR3EA5X5Y0 456 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 HCRTR1O43613 425 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 HPGDSO60760 199 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 IGHA1P01876 353 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 DBIP07108 87 aaKnown RBP15.1■□□□□ 0.01
LITAF-201ENST00000339430 THBS1P07996 1170 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 NME1P15531 152 aaKnown RBP15.1■□□□□ 0.01
LITAF-201ENST00000339430 ZNF10P21506 573 aaPredicted RBP15.1■□□□□ 0.01
LITAF-201ENST00000339430 FGF9P31371 208 aaPredicted RBP15.1■□□□□ 0.01
LITAF-201ENST00000339430 GABRA3P34903 492 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 NXPH1P58417 271 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 COPZ1P61923 177 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 KLHL12Q53G59 568 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 CD200R1LQ6Q8B3 271 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 ZAR1Q86SH2 424 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 WDR5BQ86VZ2 330 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 ARIH2OSQ8N7S6 290 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 FAM181AQ8N9Y4 354 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 NEIL3Q8TAT5 605 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 GRHL3Q8TE85 626 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 CD180Q99467 661 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 RBCK1Q9BYM8 510 aa15.1■□□□□ 0.01
LITAF-201ENST00000339430 KRCC1Q9NPI7 259 aaPredicted RBP15.1■□□□□ 0.01
LITAF-201ENST00000339430 C12orf71A8MTZ7 269 aa15.09■□□□□ 0.01
LITAF-201ENST00000339430 SGK494L7N484 410 aa15.09■□□□□ 0.01
LITAF-201ENST00000339430 HMGN1P05114 100 aa15.09■□□□□ 0.01
LITAF-201ENST00000339430 CTSBP07858 339 aa15.09■□□□□ 0.01
LITAF-201ENST00000339430 NID1P14543 1247 aa15.09■□□□□ 0.01
LITAF-201ENST00000339430 APEX1P27695 318 aaKnown RBP15.09■□□□□ 0.01
LITAF-201ENST00000339430 RCVRNP35243 200 aa15.09■□□□□ 0.01
LITAF-201ENST00000339430 DHPSP49366 369 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms