RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 PCDHGC4Q9Y5F7 938 aa6.32□□□□□ -1.4
CAST-203ENST00000338252 PCDHGA1Q9Y5H4 931 aa6.32□□□□□ -1.4
CAST-203ENST00000338252 SIRT4Q9Y6E7 314 aaPredicted RBP6.32□□□□□ -1.4
CAST-203ENST00000338252 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 F5H5P2 479 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 PPM1DO15297 605 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 OR2T1O43869 369 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 TSPAN3O60637 253 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 STK16O75716 305 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 SLC25A12O75746 678 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 PCDH8O95206 1070 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 ARIH2O95376 493 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 LATS1O95835 1130 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 ACTL6AO96019 429 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 INHAP05111 366 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 GJA1P17302 382 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 TYRP1P17643 537 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 EDNRBP24530 442 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 MC4RP32245 332 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 SLC6A11P48066 632 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 RNF144AP50876 292 aaPredicted RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 HCCSP53701 268 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 LILRA4P59901 499 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 CXADRP78310 365 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 CDK6Q00534 326 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 KCNAB1Q14722 419 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 C21orf62-AS1Q17RA5 79 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 ZNF791Q3KP31 576 aaPredicted RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 DCAF12L2Q5VW00 463 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 C18orf63Q68DL7 685 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 CXorf57Q6NSI4 855 aaKnown RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 TCTN3Q6NUS6 607 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 JMJD6Q6NYC1 403 aaPredicted RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 BAIAP2L2Q6UXY1 529 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 MBOAT1Q6ZNC8 495 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 ESPNLQ6ZVH7 1005 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 MAMDC2Q7Z304 686 aaPredicted RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 GLT6D1Q7Z4J2 308 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 CFAP206Q8IYR0 622 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 ZNF683Q8IZ20 524 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 C15orf54Q8N8G6 183 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 HJURPQ8NCD3 748 aaPredicted RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 TTC16Q8NEE8 873 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 OR4D9Q8NGE8 314 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 OR52N2Q8NGI0 321 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 OR52B4Q8NGK2 314 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 SMAP2Q8WU79 429 aaPredicted RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 RHOVQ96L33 236 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 POLR1EQ9GZS1 481 aaKnown RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 CRISPLD2Q9H0B8 497 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 GOLGA2P5Q9HBQ8 144 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 MRPL17Q9NRX2 175 aaKnown RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 SPG21Q9NZD8 308 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 MRPL15Q9P015 296 aaKnown RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 PTGFRNQ9P2B2 879 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 ZNF106Q9H2Y7 1883 aaKnown RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 TRAPPC13A5PLN9 417 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 HBP1O60381 514 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 TRBC1P01850 177 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 SERPIND1P05546 499 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 SAGP10523 405 aaPredicted RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 ELNP15502 786 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 UQCRC2P22695 453 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 VAMP1P23763 118 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 ITGA3P26006 1051 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 HOXA11P31270 313 aaPredicted RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 ART1P52961 327 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 GMFBP60983 142 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 TLE2Q04725 743 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 ELAVL2Q12926 359 aaKnown RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 TNFAIP1Q13829 316 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 ZXDCQ2QGD7 858 aaPredicted RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 LINC00303Q3SY05 128 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 FAM27D1Q5T7N8 215 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 OLFML2AQ68BL7 652 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 TMEM71Q6P5X7 295 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 ZCCHC12Q6PEW1 402 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 ZNF322Q6U7Q0 402 aaPredicted RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 ZNF813Q6ZN06 617 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 RNF175Q8N4F7 328 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 ZNF561Q8N587 486 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 AKR7LQ8NHP1 331 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 SLC7A13Q8TCU3 470 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 PCED1BQ96HM7 432 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 TEAD3Q99594 435 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 GPA33Q99795 319 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 JAM3Q9BX67 310 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 RDH14Q9HBH5 336 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 PRDM5Q9NQX1 630 aaPredicted RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 ACSS1Q9NUB1 689 aaPredicted RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 C2orf42Q9NWW7 574 aa6.31□□□□□ -1.4
CAST-203ENST00000338252 EXOGQ9Y2C4 368 aaKnown RBP6.31□□□□□ -1.4
CAST-203ENST00000338252 TRAV14DV4A0A0A6YYC5 116 aa6.3□□□□□ -1.4
CAST-203ENST00000338252 RFPL4AA6NLU0 287 aa6.3□□□□□ -1.4
CAST-203ENST00000338252 RFPL4AL1F8VTS6 287 aa6.3□□□□□ -1.4
CAST-203ENST00000338252 BLOC1S5-TXNDC5H3BN57 136 aa6.3□□□□□ -1.4
CAST-203ENST00000338252 RNASET2O00584 256 aaKnown RBP6.3□□□□□ -1.4
CAST-203ENST00000338252 GPR39O43194 453 aa6.3□□□□□ -1.4
CAST-203ENST00000338252 KRT33AO76009 404 aa6.3□□□□□ -1.4
CAST-203ENST00000338252 MOCS2O96007 188 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms