RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 MARVELD2Q8N4S9 558 aa11.54□□□□□ -0.56
FN1-202ENST00000336916 GATSQ8NAP1 163 aa11.54□□□□□ -0.56
FN1-202ENST00000336916 IER2Q9BTL4 223 aa11.54□□□□□ -0.56
FN1-202ENST00000336916 MRPS2Q9Y399 296 aaKnown RBP11.54□□□□□ -0.56
FN1-202ENST00000336916 CDKN2CP42773 168 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 GGTA1PQ4G0N0 100 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 ZNF454Q8N9F8 522 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 SLC41A2Q96JW4 573 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 AJAP1Q9UKB5 411 aaPredicted RBP11.53□□□□□ -0.56
FN1-202ENST00000336916 EIF4EP06730 217 aaKnown RBP11.53□□□□□ -0.56
FN1-202ENST00000336916 FCGR2AP12318 317 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 PDE7AQ13946 482 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 ISCA2Q86U28 154 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 SLC22A16Q86VW1 577 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 MALSU1Q96EH3 234 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 EGLN1Q9GZT9 426 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 EIF5A2Q9GZV4 153 aaKnown RBP11.53□□□□□ -0.56
FN1-202ENST00000336916 GORASP2Q9H8Y8 452 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 SDHDO14521 159 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 SLC34A2O95436 690 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 FCER2P06734 321 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 NAA10P41227 235 aaPredicted RBP11.53□□□□□ -0.56
FN1-202ENST00000336916 MAGEA6P43360 314 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 ALDH3B2P48448 385 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 RACK1P63244 317 aaKnown RBP11.53□□□□□ -0.56
FN1-202ENST00000336916 DNASE1L3Q13609 305 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 CPZQ66K79 652 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 CNTN4Q8IWV2 1026 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 CNEP1R1Q8N9A8 125 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 BOD1Q96IK1 185 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 PDLIM7Q9NR12 457 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 PLEK2Q9NYT0 353 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 TMEM212A6NML5 194 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 RAB40ALP0C0E4 278 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 MSL3P1P0C860 447 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 F2RL1P55085 397 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 EEF1A1P68104 462 aaKnown RBP11.53□□□□□ -0.56
FN1-202ENST00000336916 ZADH2Q8N4Q0 377 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 C19orf47Q8N9M1 422 aaKnown RBP11.53□□□□□ -0.56
FN1-202ENST00000336916 RAB40AQ8WXH6 277 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 TAAR8Q969N4 342 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 UBXN10Q96LJ8 280 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 CCDC106Q9BWC9 280 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 F5H0A9 414 aaPredicted RBP11.53□□□□□ -0.56
FN1-202ENST00000336916 CRTAPO75718 401 aaPredicted RBP11.53□□□□□ -0.56
FN1-202ENST00000336916 PRKACBP22694 351 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 CTHP32929 405 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 PTGS2P35354 604 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 SOX2P48431 317 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 ATP1B3P54709 279 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 JPH3Q8WXH2 748 aaPredicted RBP11.53□□□□□ -0.56
FN1-202ENST00000336916 MAELQ96JY0 434 aaKnown RBP11.53□□□□□ -0.56
FN1-202ENST00000336916 CORINQ9Y5Q5 1042 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 ZNF736B4DX44 427 aaPredicted RBP11.53□□□□□ -0.56
FN1-202ENST00000336916 ZNF587BE7ETH6 402 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 TRAPPC2LH3BP13 241 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 NR4A2P43354 598 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 OR4D1Q15615 310 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 TAZQ16635 292 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 WDR88Q6ZMY6 472 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 TRIM43Q96BQ3 446 aaPredicted RBP11.53□□□□□ -0.56
FN1-202ENST00000336916 MGAT4CQ9UBM8 478 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 SLC7A7Q9UM01 511 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 TSPAN4O14817 238 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 GPR75O95800 540 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 GPR50Q13585 617 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 TMEM239Q8WW34 195 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 MAL2Q969L2 176 aa11.53□□□□□ -0.56
FN1-202ENST00000336916 ABCA7Q8IZY2 2146 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 HSBP1L1C9JCN9 74 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 MED6O75586 246 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 DIRAS1O95057 198 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 ACVR1BP36896 505 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 KIF18BQ86Y91 864 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 SIAH1Q8IUQ4 282 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 SLC6A20Q9NP91 592 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 COQ3Q9NZJ6 369 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 CBLCQ9ULV8 474 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 CAMK2AQ9UQM7 478 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 ZNF646O15015 1829 aaPredicted RBP11.52□□□□□ -0.56
FN1-202ENST00000336916 DENRO43583 198 aaKnown RBP11.52□□□□□ -0.56
FN1-202ENST00000336916 AOAHP28039 575 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 IDUAP35475 653 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 CX3CR1P49238 355 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 C1orf61Q13536 156 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 SLC35F2Q8IXU6 374 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 CASTOR1Q8WTX7 329 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 C1QTNF2Q9BXJ5 285 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 KCNIP2Q9NS61 270 aa11.52□□□□□ -0.56
FN1-202ENST00000336916 CXCR4P61073 352 aa11.52□□□□□ -0.57
FN1-202ENST00000336916 KLBQ86Z14 1044 aa11.52□□□□□ -0.57
FN1-202ENST00000336916 ELSPBP1Q96BH3 223 aa11.52□□□□□ -0.57
FN1-202ENST00000336916 C1orf198Q9H425 327 aa11.52□□□□□ -0.57
FN1-202ENST00000336916 C19orf12Q9NSK7 152 aa11.52□□□□□ -0.57
FN1-202ENST00000336916 ERVK-19Q9WJR5 959 aa11.52□□□□□ -0.57
FN1-202ENST00000336916 PSAT1Q9Y617 370 aa11.52□□□□□ -0.57
FN1-202ENST00000336916 PCNX1Q96RV3 2341 aa11.52□□□□□ -0.57
FN1-202ENST00000336916 LOC285095A0A1B0GVY8 99 aa11.52□□□□□ -0.57
FN1-202ENST00000336916 ANKRD34BA5PLL1 514 aa11.52□□□□□ -0.57
FN1-202ENST00000336916 SNNO75324 88 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms