RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 SF3B4Q15427 424 aaKnown RBP eCLIP16.6■□□□□ 0.25
HLA-F-217ENST00000334668 RUNDC3AQ59EK9 446 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 PRAMEF8Q5VWM4 474 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 PRAMEF7Q5VXH5 474 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 RAET1LQ5VY80 246 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 NSUN5P2Q63ZY6 315 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 EIF3MQ7L2H7 374 aaKnown RBP16.6■□□□□ 0.25
HLA-F-217ENST00000334668 ZNF614Q8N883 585 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 OR5W2Q8NH69 310 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 RND1Q92730 232 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 ZBTB8AQ96BR9 441 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 NPAS1Q99742 590 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 CPPED1Q9BRF8 314 aaPredicted RBP16.6■□□□□ 0.25
HLA-F-217ENST00000334668 IKZF5Q9H5V7 419 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 CALHM2Q9HA72 323 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 A4GALTQ9NPC4 353 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 ALKBH4Q9NXW9 302 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 CALML5Q9NZT1 146 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 CAMK2AQ9UQM7 478 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 VDAC3Q9Y277 283 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 SLC35A3Q9Y2D2 325 aa16.6■□□□□ 0.25
HLA-F-217ENST00000334668 CD8B2A6NJW9 211 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 KDM4EB2RXH2 506 aaPredicted RBP16.59■□□□□ 0.25
HLA-F-217ENST00000334668 ANGPT2O15123 496 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 GMFGO60234 142 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 CSTAP01040 98 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 DRD4P21917 467 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 TCEA1P23193 301 aaKnown RBP16.59■□□□□ 0.25
HLA-F-217ENST00000334668 ZNF41P51814 821 aaPredicted RBP16.59■□□□□ 0.25
HLA-F-217ENST00000334668 CRISP3P54108 245 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 GYS2P54840 703 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 CLDN15P56746 228 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 KCNJ10P78508 379 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 ART3Q13508 389 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 NDUFAF6Q330K2 333 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 COQ5Q5HYK3 327 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 RIPPLY2Q5TAB7 128 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 DHDDSQ86SQ9 333 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 CMIPQ8IY22 773 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 C10orf111Q8N326 155 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 POC1BQ8TC44 478 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 ZNF524Q96C55 264 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 CGREF1Q99674 301 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 QRSL1Q9H0R6 528 aaKnown RBP16.59■□□□□ 0.25
HLA-F-217ENST00000334668 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.59■□□□□ 0.25
HLA-F-217ENST00000334668 CORO2BQ9UQ03 480 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 AP4B1Q9Y6B7 739 aa16.59■□□□□ 0.25
HLA-F-217ENST00000334668 HCFC1P51610 2035 aa16.58■□□□□ 0.25
HLA-F-217ENST00000334668 SHISA8B8ZZ34 492 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 BCAS1O75363 584 aaPredicted RBP16.58■□□□□ 0.24
HLA-F-217ENST00000334668 NTN1O95631 604 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 ARAFP10398 606 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 ADH6P28332 368 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 CEACAM8P31997 349 aaPredicted RBP16.58■□□□□ 0.24
HLA-F-217ENST00000334668 TIMP3P35625 211 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 EIF1P41567 113 aaKnown RBP16.58■□□□□ 0.24
HLA-F-217ENST00000334668 DLX5P56178 289 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 GNA13Q14344 377 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 CDSNQ15517 529 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 SLC25A53Q5H9E4 307 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 MAMDC2Q7Z304 686 aaPredicted RBP16.58■□□□□ 0.24
HLA-F-217ENST00000334668 SPATA21Q7Z572 469 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 LACC1Q8IV20 430 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 OR5M1Q8NGP8 315 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 TMEM19Q96HH6 336 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 ANKRD27Q96NW4 1050 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 TREX2Q9BQ50 279 aaPredicted RBP16.58■□□□□ 0.24
HLA-F-217ENST00000334668 TUBA1CQ9BQE3 449 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 PRR14Q9BWN1 585 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 BCL2L10Q9HD36 194 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 EXOSC3Q9NQT5 275 aaKnown RBP16.58■□□□□ 0.24
HLA-F-217ENST00000334668 PLEKHB1Q9UF11 243 aaPredicted RBP16.58■□□□□ 0.24
HLA-F-217ENST00000334668 RNF6Q9Y252 685 aa16.58■□□□□ 0.24
HLA-F-217ENST00000334668 KLF2Q9Y5W3 355 aaPredicted RBP16.58■□□□□ 0.24
HLA-F-217ENST00000334668 A0A0G2JPF8 293 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 GMNCA6NCL1 334 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 MBD3L4A6NDZ8 208 aaPredicted RBP16.57■□□□□ 0.24
HLA-F-217ENST00000334668 MBD3L3A6NE82 208 aaPredicted RBP16.57■□□□□ 0.24
HLA-F-217ENST00000334668 MBD3L5A6NJ08 208 aaPredicted RBP16.57■□□□□ 0.24
HLA-F-217ENST00000334668 HNRNPCL2B2RXH8 293 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 HNRNPCL3B7ZW38 293 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 FAM47E-STBD1D6RA91 191 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 SNX3O60493 162 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 HNRNPCL1O60812 293 aaKnown RBP16.57■□□□□ 0.24
HLA-F-217ENST00000334668 TOXO94900 526 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 BCHEP06276 602 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 DBIP07108 87 aaKnown RBP16.57■□□□□ 0.24
HLA-F-217ENST00000334668 HNRNPCL4P0DMR1 293 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 NID1P14543 1247 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 POU3F2P20265 443 aaPredicted RBP16.57■□□□□ 0.24
HLA-F-217ENST00000334668 CBFBQ13951 182 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 TOMM34Q15785 309 aaPredicted RBP16.57■□□□□ 0.24
HLA-F-217ENST00000334668 ADRM1Q16186 407 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 METTL25Q8N6Q8 603 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 MBD3L2Q8NHZ7 208 aaPredicted RBP16.57■□□□□ 0.24
HLA-F-217ENST00000334668 ASB5Q8WWX0 329 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 MAL2Q969L2 176 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 ELAC2Q9BQ52 826 aaKnown RBP16.57■□□□□ 0.24
HLA-F-217ENST00000334668 TMEM38AQ9H6F2 299 aa16.57■□□□□ 0.24
HLA-F-217ENST00000334668 FAM53CQ9NYF3 392 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms