RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SEMA4CQ9C0C4 833 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 DDX31Q9H8H2 851 aaKnown RBP16.92■□□□□ 0.3
PKP3-201ENST00000331563 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.92■□□□□ 0.38e-9■■■■■ 30.9
PKP3-201ENST00000331563 A0A1W2PRQ8 180 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 NEDD8-MDP1E9PL57 170 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 SDC3O75056 442 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 UBXN7O94888 489 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 HTR3BO95264 441 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 ACP5P13686 325 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 EPCAMP16422 314 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 THBS2P35442 1172 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 MANFP55145 182 aaKnown RBP16.92■□□□□ 0.3
PKP3-201ENST00000331563 SLC3A1Q07837 685 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 LGALS3BPQ08380 585 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 CNTN1Q12860 1018 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 HLXQ14774 488 aaPredicted RBP16.92■□□□□ 0.3
PKP3-201ENST00000331563 CEACAM19Q7Z692 300 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 SORCS1Q8WY21 1168 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 MTG2Q9H4K7 406 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 CERS4Q9HA82 394 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 IL20RAQ9UHF4 553 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 CD84Q9UIB8 345 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 MCRIP1C9JLW8 97 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 ATG12O94817 140 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 MPC1LP0DKB6 136 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 GSTM3P21266 225 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 S100A11P31949 105 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 AP1S1P61966 158 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 HSPB3Q12988 150 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 CCSMST1Q4G0I0 132 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 OR5M10Q6IEU7 315 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 OLIG3Q7RTU3 272 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 KRT78Q8N1N4 520 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 C12orf45Q8N5I9 185 aaPredicted RBP16.92■□□□□ 0.3
PKP3-201ENST00000331563 BBS1Q8NFJ9 593 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 ARMC5Q96C12 935 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 CA10Q9NS85 328 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 EPHA6Q9UF33 1036 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 CKAP5Q14008 2032 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 NPIPB15A6NHN6 443 aaPredicted RBP16.91■□□□□ 0.3
PKP3-201ENST00000331563 ARPC1BO15143 372 aaKnown RBP16.91■□□□□ 0.3
PKP3-201ENST00000331563 ZNF821O75541 412 aaPredicted RBP16.91■□□□□ 0.3
PKP3-201ENST00000331563 UBL3O95164 117 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 S100A9P06702 114 aaKnown RBP16.91■□□□□ 0.3
PKP3-201ENST00000331563 GAAP10253 952 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 POGLUT1Q8NBL1 392 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 GANCQ8TET4 914 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 ZFPM2Q8WW38 1151 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 FGF11Q92914 225 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 NEIL2Q969S2 332 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 AUNIPQ9H7T9 357 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 NIT2Q9NQR4 276 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 NFKBIL1Q9UBC1 381 aaPredicted RBP16.91■□□□□ 0.3
PKP3-201ENST00000331563 INSL6Q9Y581 213 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 SIRT4Q9Y6E7 314 aaPredicted RBP16.91■□□□□ 0.3
PKP3-201ENST00000331563 FXYD6-FXYD2A0A087WZ82 144 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 TRBV23-1A0A0A0MS06 115 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 AGAP14A8MT82 685 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 SLC16A5O15375 505 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 SNRPBP14678 240 aaKnown RBP16.91■□□□□ 0.3
PKP3-201ENST00000331563 POM121L1PQ3SYA9 428 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 C1orf94Q6P1W5 598 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 XAGE5Q8WWM1 108 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 PTDSS2Q9BVG9 487 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 TEX12Q9BXU0 123 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 FXYD6Q9H0Q3 95 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 KLHL42Q9P2K6 505 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 MKL2Q9ULH7 1088 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 RCE1Q9Y256 329 aa16.91■□□□□ 0.3
PKP3-201ENST00000331563 KDM4EB2RXH2 506 aaPredicted RBP16.9■□□□□ 0.3
PKP3-201ENST00000331563 ACADLP28330 430 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 GDNFP39905 211 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 BUD31P41223 144 aaPredicted RBP16.9■□□□□ 0.3
PKP3-201ENST00000331563 MMP15P51511 669 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 MEF2AQ02078 507 aaPredicted RBP16.9■□□□□ 0.3
PKP3-201ENST00000331563 SERTAD2Q14140 314 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 ZNF613Q6PF04 617 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 CD300LDQ6UXZ3 194 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 C12orf40Q86WS4 652 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 DCAF4L2Q8NA75 395 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 OR1S1Q8NH92 325 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 ZDHHC1Q8WTX9 485 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 THAP4Q8WY91 577 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 ZNF285Q96NJ3 590 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 IFT27Q9BW83 186 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 OR51I1Q9H343 314 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 STOX2Q9P2F5 926 aaPredicted RBP16.9■□□□□ 0.3
PKP3-201ENST00000331563 OR2AG2A6NM03 316 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 SLC16A8O95907 504 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 PAICSP22234 425 aaKnown RBP16.9■□□□□ 0.3
PKP3-201ENST00000331563 GK2Q14410 553 aaPredicted RBP16.9■□□□□ 0.3
PKP3-201ENST00000331563 CAMKVQ8NCB2 501 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 PDCD10Q9BUL8 212 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 A4GALTQ9NPC4 353 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 SPHK1Q9NYA1 384 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 MED11Q9P086 117 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 TRPC4Q9UBN4 977 aa16.9■□□□□ 0.3
PKP3-201ENST00000331563 A0A1W2PPK0 400 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 FAM183AA6NL82 134 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 SUSD5O60279 629 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms