RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 HLA-DQA1Q5Y7H0 255 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 ULK3Q6PHR2 472 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 ARHGAP22Q7Z5H3 698 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 CADM2Q8N3J6 435 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 OR4Q3Q8NH05 313 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 CEP76Q8TAP6 659 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 LCORQ96JN0 433 aaPredicted RBP12.88□□□□□ -0.35
TRAIP-201ENST00000331456 MGLLQ99685 303 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 OR52D1Q9H346 318 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 FSCN3Q9NQT6 498 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 UBQLN4Q9NRR5 601 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 CHCHD3Q9NX63 227 aaKnown RBP12.88□□□□□ -0.35
TRAIP-201ENST00000331456 LY6G6EA0A0G2JKS1 128 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 MYL12BO14950 172 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 DDAH2O95865 285 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 IGKV3-11P04433 115 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 SAGP10523 405 aaPredicted RBP12.88□□□□□ -0.35
TRAIP-201ENST00000331456 MYL12AP19105 171 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 MAKP20794 623 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 GADD45AP24522 165 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 GRK5P34947 590 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 HOXD12P35452 270 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 RGS6P49758 472 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 C1DQ13901 141 aaKnown RBP12.88□□□□□ -0.35
TRAIP-201ENST00000331456 TIMM50Q3ZCQ8 353 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 RHBDD2Q6NTF9 364 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 HSDL2Q6YN16 418 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 ZNF574Q6ZN55 896 aaPredicted RBP12.88□□□□□ -0.35
TRAIP-201ENST00000331456 SLCO6A1Q86UG4 719 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 ZNF321PQ8N8H1 164 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 PROKR2Q8NFJ6 384 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 OR52I1Q8NGK6 324 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 OR4C3Q8NH37 302 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 NDNFQ8TB73 568 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 ZNF721Q8TF20 911 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 EFHD2Q96C19 240 aaPredicted RBP12.88□□□□□ -0.35
TRAIP-201ENST00000331456 ZHX1-C8orf76Q96EF9 292 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 OR5M11Q96RB7 305 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 LRRN3Q9H3W5 708 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 SYNDIG1Q9H7V2 258 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 HHATLQ9HCP6 504 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 C20orf141Q9NUB4 165 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 MRPS18AQ9NVS2 196 aaKnown RBP12.88□□□□□ -0.35
TRAIP-201ENST00000331456 H2AFY2Q9P0M6 372 aaPredicted RBP12.88□□□□□ -0.35
TRAIP-201ENST00000331456 COPS7AQ9UBW8 275 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 MKL2Q9ULH7 1088 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 GPR52Q9Y2T5 361 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 U3KQA8 63 aa12.88□□□□□ -0.35
TRAIP-201ENST00000331456 NUP210LQ5VU65 1888 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 SCDO00767 359 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 HCN1O60741 890 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 CH25HO95992 272 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 LCN1P31025 176 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 MTNR1AP48039 350 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 GPR143P51810 404 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 MLLT10P55197 1068 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 NCS1P62166 190 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 KLHL26Q53HC5 615 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 ADCK1Q86TW2 530 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 PRSS58Q8IYP2 241 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 EID2Q8N6I1 236 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 NANOGP1Q8N7R0 232 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 PLPP5Q8NEB5 264 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 DNAJA4Q8WW22 397 aaPredicted RBP12.87□□□□□ -0.35
TRAIP-201ENST00000331456 RPL3LQ92901 407 aaKnown RBP12.87□□□□□ -0.35
TRAIP-201ENST00000331456 DTNBP1Q96EV8 351 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 RNFT2Q96EX2 444 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 SH3GL3Q99963 347 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 VN1R1Q9GZP7 353 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 NXF5Q9H1B4 397 aaKnown RBP12.87□□□□□ -0.35
TRAIP-201ENST00000331456 UBQLN3Q9H347 655 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 ATP13A2Q9NQ11 1180 aa12.87□□□□□ -0.35
TRAIP-201ENST00000331456 C2orf92A0A1B0GVN3 265 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 A0A1W2PQM1 296 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 CCRL2O00421 344 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 CER1O95813 267 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 ADRA2AP08913 450 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 UGT2B10P36537 528 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 ADH7P40394 386 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 CDH11P55287 796 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 TUBA1BP68363 451 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 SPHARQ15513 63 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 TSTQ16762 297 aaKnown RBP12.86□□□□□ -0.35
TRAIP-201ENST00000331456 C3orf38Q5JPI3 329 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 SMARCD3Q6STE5 483 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 TUBA1AQ71U36 451 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 SLC29A4Q7RTT9 530 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 TMPRSS9Q7Z410 1059 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 CROCCP3Q8IVE0 287 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 MAML2Q8IZL2 1156 aaPredicted RBP12.86□□□□□ -0.35
TRAIP-201ENST00000331456 ZC3H10Q96K80 434 aaKnown RBP12.86□□□□□ -0.35
TRAIP-201ENST00000331456 GAL3ST4Q96RP7 486 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 NUDT9Q9BW91 350 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 TGIF2Q9GZN2 237 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 FGF20Q9NP95 211 aaPredicted RBP12.86□□□□□ -0.35
TRAIP-201ENST00000331456 RARRES3Q9UL19 164 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 IGHV5-10-1A0A0J9YXX1 117 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 OR6C76A6NM76 312 aa12.86□□□□□ -0.35
TRAIP-201ENST00000331456 FOXD2O60548 495 aaPredicted RBP12.86□□□□□ -0.35
TRAIP-201ENST00000331456 UTS2O95399 124 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms