RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 CRTC1Q6UUV9 634 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 APOOLQ6UXV4 268 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 WFDC5Q8TCV5 224 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 WDR89Q96FK6 387 aaPredicted RBP22.66■■□□□ 1.22
SOX1-201ENST00000330949 SOCS6O14544 535 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 TBL1XO60907 577 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 REM1O75628 298 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 SERPINA3P01011 423 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 MT-ND5P03915 603 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 RLN2P04090 185 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 ASGR2P07307 311 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 SYPL1Q16563 259 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 PGGHGQ32M88 737 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 GID4Q8IVV7 300 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 MMP21Q8N119 569 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 FAM46AQ96IP4 442 aaKnown RBP22.66■■□□□ 1.22
SOX1-201ENST00000330949 LYSMD1Q96S90 227 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 EDARQ9UNE0 448 aa22.66■■□□□ 1.22
SOX1-201ENST00000330949 DAPL1A0PJW8 107 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 RFXAPO00287 272 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 CATP04040 527 aaKnown RBP22.65■■□□□ 1.22
SOX1-201ENST00000330949 ATP1B1P05026 303 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 EPXP11678 715 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 TBXA2RP21731 343 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 IMPA1P29218 277 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 TAS2R43P59537 309 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 SWI5Q1ZZU3 235 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 HENMT1Q5T8I9 393 aaKnown RBP22.65■■□□□ 1.22
SOX1-201ENST00000330949 CCDC36Q8IYA8 594 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 EID2Q8N6I1 236 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 UTP23Q9BRU9 249 aaKnown RBP22.65■■□□□ 1.22
SOX1-201ENST00000330949 NDC1Q9BTX1 674 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 PRKAB1Q9Y478 270 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 SLCO2B1O94956 709 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 SNAPINO95295 136 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 FGL2Q14314 439 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 SLBPQ14493 270 aaKnown RBP eCLIP22.65■■□□□ 1.22
SOX1-201ENST00000330949 MICBQ29980 383 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 HS6ST3Q8IZP7 471 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 TIMP4Q99727 224 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 EFCAB11Q9BUY7 163 aa22.65■■□□□ 1.22
SOX1-201ENST00000330949 A0A0B4J203 849 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 UBE2QL1A1L167 161 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 NR2F1P10589 423 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 ANXA7P20073 488 aaKnown RBP22.64■■□□□ 1.22
SOX1-201ENST00000330949 XPAP23025 273 aaPredicted RBP22.64■■□□□ 1.22
SOX1-201ENST00000330949 MST1P26927 711 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 RFC3P40938 356 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 ACSM3Q53FZ2 586 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 UBE2NLQ5JXB2 153 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 ZNF704Q6ZNC4 412 aaPredicted RBP22.64■■□□□ 1.22
SOX1-201ENST00000330949 TPRG1Q6ZUI0 275 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 CPOQ8IVL8 374 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 IZUMO1Q8IYV9 350 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 SLC22A8Q8TCC7 542 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 PLD4Q96BZ4 506 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 TMEM169Q96HH4 297 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 CMTM3Q96MX0 182 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 CAMK1GQ96NX5 476 aa22.64■■□□□ 1.22
SOX1-201ENST00000330949 HINT3Q9NQE9 182 aaKnown RBP22.64■■□□□ 1.22
SOX1-201ENST00000330949 TRAV1-2A0A0B4J238 106 aa22.64■■□□□ 1.21
SOX1-201ENST00000330949 DISC1C4P0D8 188 aa22.64■■□□□ 1.21
SOX1-201ENST00000330949 NEDD8-MDP1E9PL57 170 aa22.64■■□□□ 1.21
SOX1-201ENST00000330949 GABARAPH6UMI1 98 aa22.64■■□□□ 1.21
SOX1-201ENST00000330949 TAS2R41P59536 307 aa22.64■■□□□ 1.21
SOX1-201ENST00000330949 RELL2Q8NC24 303 aaPredicted RBP22.64■■□□□ 1.21
SOX1-201ENST00000330949 PIGXQ8TBF5 258 aa22.64■■□□□ 1.21
SOX1-201ENST00000330949 TBX5Q99593 518 aa22.64■■□□□ 1.21
SOX1-201ENST00000330949 TSNAXQ99598 290 aaKnown RBP22.64■■□□□ 1.21
SOX1-201ENST00000330949 GINS4Q9BRT9 223 aa22.64■■□□□ 1.21
SOX1-201ENST00000330949 KLHL9Q9P2J3 617 aa22.64■■□□□ 1.21
SOX1-201ENST00000330949 KLF15Q9UIH9 416 aa22.64■■□□□ 1.21
SOX1-201ENST00000330949 TRAV20A0A0B4J274 112 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 ZNF840PA6NDX5 716 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 ZNF749O43361 778 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 MECP2P51608 486 aaKnown RBP22.63■■□□□ 1.21
SOX1-201ENST00000330949 CCSMST1Q4G0I0 132 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 SVBPQ8N300 66 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 C12orf45Q8N5I9 185 aaPredicted RBP22.63■■□□□ 1.21
SOX1-201ENST00000330949 ZNF671Q8TAW3 534 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 SMPDL3AQ92484 453 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 SLC22A12Q96S37 553 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 GPN3Q9UHW5 284 aaPredicted RBP22.63■■□□□ 1.21
SOX1-201ENST00000330949 KHDRBS3O75525 346 aaKnown RBP22.63■■□□□ 1.21
SOX1-201ENST00000330949 IGF2P01344 180 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 GLAP06280 429 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 MPGP29372 298 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 ZNF613Q6PF04 617 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 GJD3Q8N144 294 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 GANCQ8TET4 914 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.63■■□□□ 1.21
SOX1-201ENST00000330949 TDP1Q9NUW8 608 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 LRFN2Q9ULH4 789 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 A0A0G2JPF8 293 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 TMEM88BA6NKF7 163 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 HNRNPCL3B7ZW38 293 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 GNB5O14775 395 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 FLRT2O43155 660 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 FABP1P07148 127 aa22.63■■□□□ 1.21
SOX1-201ENST00000330949 UBBP0CG47 229 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms