RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 HIST2H2BCQ6DN03 193 aa13.96□□□□□ -0.17
TSFM-201ENST00000323833 EIF3MQ7L2H7 374 aaKnown RBP13.96□□□□□ -0.17
TSFM-201ENST00000323833 MAMDC2Q7Z304 686 aaPredicted RBP13.96□□□□□ -0.17
TSFM-201ENST00000323833 DPP10Q8N608 796 aa13.96□□□□□ -0.17
TSFM-201ENST00000323833 ZPLD1Q8TCW7 415 aa13.96□□□□□ -0.17
TSFM-201ENST00000323833 SMPDL3BQ92485 455 aa13.96□□□□□ -0.17
TSFM-201ENST00000323833 ZBTB8AQ96BR9 441 aa13.96□□□□□ -0.17
TSFM-201ENST00000323833 TMEM19Q96HH6 336 aa13.96□□□□□ -0.17
TSFM-201ENST00000323833 RNF145Q96MT1 663 aa13.96□□□□□ -0.17
TSFM-201ENST00000323833 THUMPD3Q9BV44 507 aaKnown RBP13.96□□□□□ -0.17
TSFM-201ENST00000323833 LAT2Q9GZY6 243 aa13.96□□□□□ -0.17
TSFM-201ENST00000323833 MTHFD2LQ9H903 347 aaPredicted RBP13.96□□□□□ -0.17
TSFM-201ENST00000323833 COQ3Q9NZJ6 369 aa13.96□□□□□ -0.17
TSFM-201ENST00000323833 Q9UFV3 132 aa13.96□□□□□ -0.17
TSFM-201ENST00000323833 AGAP5A6NIR3 686 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 TOXO94900 526 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 OPN1LWP04000 364 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 BMP2P12643 396 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 ZNF17P17021 662 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 IL11P20809 199 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 AGAP20933 346 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 DRD4P21917 467 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 RPS4Y1P22090 263 aaKnown RBP13.95□□□□□ -0.18
TSFM-201ENST00000323833 PPIBP23284 216 aaKnown RBP13.95□□□□□ -0.18
TSFM-201ENST00000323833 PSMA4P25789 261 aaKnown RBP13.95□□□□□ -0.18
TSFM-201ENST00000323833 CRISP3P54108 245 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 SUMO3P55854 103 aaPredicted RBP13.95□□□□□ -0.18
TSFM-201ENST00000323833 CLDN15P56746 228 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 CLDN20P56880 219 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 GNGT1P63211 74 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 KCNJ10P78508 379 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 PLAURQ03405 335 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 FOXF1Q12946 379 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 NFYCQ13952 458 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 SELPLGQ14242 412 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 SF3B4Q15427 424 aaKnown RBP eCLIP13.95□□□□□ -0.18
TSFM-201ENST00000323833 BCL2A1Q16548 175 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 NSUN5P2Q63ZY6 315 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 SPATA21Q7Z572 469 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 GTPBP8Q8N3Z3 284 aaPredicted RBP13.95□□□□□ -0.18
TSFM-201ENST00000323833 TOR1AIP2Q8NFQ8 470 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 TNIP2Q8NFZ5 429 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 OR5W2Q8NH69 310 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 WDR60Q8WVS4 1066 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 OIT3Q8WWZ8 545 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 CGREF1Q99674 301 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 TREX2Q9BQ50 279 aaPredicted RBP13.95□□□□□ -0.18
TSFM-201ENST00000323833 CPPED1Q9BRF8 314 aaPredicted RBP13.95□□□□□ -0.18
TSFM-201ENST00000323833 A4GALTQ9NPC4 353 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 ASH1LQ9NR48 2969 aaKnown RBP13.95□□□□□ -0.18
TSFM-201ENST00000323833 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.95□□□□□ -0.18
TSFM-201ENST00000323833 THUMPD1Q9NXG2 353 aaKnown RBP13.95□□□□□ -0.18
TSFM-201ENST00000323833 CALML5Q9NZT1 146 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 ARMCX1Q9P291 453 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 SLC35A3Q9Y2D2 325 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 GMEB1Q9Y692 573 aa13.95□□□□□ -0.18
TSFM-201ENST00000323833 DSPPQ9NZW4 1301 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 LOC100653049A0A140TA62 436 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 C7orf72A4D263 438 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 GMNCA6NCL1 334 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 TMEM247A6NEH6 219 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 CLCA1A8K7I4 914 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 EVPLLA8MZ36 301 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 LINC01387J3KSC0 135 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 KRT34O76011 436 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 CLDN14O95500 239 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 IL7RP16871 459 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 PRKCAP17252 672 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 GPX2P18283 190 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 ART3Q13508 389 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 CBFBQ13951 182 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 CAPRIN1Q14444 709 aaKnown RBP13.94□□□□□ -0.18
TSFM-201ENST00000323833 QPRTQ15274 297 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 GCNT6Q5T4J0 391 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 RIPPLY2Q5TAB7 128 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 SNX32Q86XE0 403 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 VRK2Q86Y07 508 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 LACC1Q8IV20 430 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 MEIOBQ8N635 442 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 NAXEQ8NCW5 288 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 FAM71CQ8NEG0 241 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 OR52P1PQ8NH57 321 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 FBXO27Q8NI29 283 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 CNOT9Q92600 299 aaKnown RBP13.94□□□□□ -0.18
TSFM-201ENST00000323833 ANKRD27Q96NW4 1050 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 TMEM185BQ9H7F4 350 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 CALHM2Q9HA72 323 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 MRGBPQ9NV56 204 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 AP4B1Q9Y6B7 739 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 CAPN7Q9Y6W3 813 aa13.94□□□□□ -0.18
TSFM-201ENST00000323833 A0A0G2JPF8 293 aa13.93□□□□□ -0.18
TSFM-201ENST00000323833 CD8B2A6NJW9 211 aa13.93□□□□□ -0.18
TSFM-201ENST00000323833 HNRNPCL2B2RXH8 293 aa13.93□□□□□ -0.18
TSFM-201ENST00000323833 HNRNPCL3B7ZW38 293 aa13.93□□□□□ -0.18
TSFM-201ENST00000323833 C5orf58C9J3I9 102 aa13.93□□□□□ -0.18
TSFM-201ENST00000323833 PRSS44E7EML9 344 aa13.93□□□□□ -0.18
TSFM-201ENST00000323833 EFNA2O43921 213 aa13.93□□□□□ -0.18
TSFM-201ENST00000323833 HNRNPCL1O60812 293 aaKnown RBP13.93□□□□□ -0.18
TSFM-201ENST00000323833 DBIP07108 87 aaKnown RBP13.93□□□□□ -0.18
TSFM-201ENST00000323833 HNRNPCL4P0DMR1 293 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms