RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CD3GP09693 182 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 PTPRBP23467 1997 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 GIPRP48546 466 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 DGKZQ13574 1117 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 SNTB1Q13884 538 aaKnown RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 HIST2H3PS2Q5TEC6 136 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 SHFQ7M4L6 423 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 SCAMP5Q8TAC9 235 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 C2orf15Q8WU43 125 aaKnown RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 SPRYD4Q8WW59 207 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 SMPDL3AQ92484 453 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 C4orf36Q96KX1 117 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 PRRC1Q96M27 445 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 C1GALT1Q9NS00 363 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF226Q9NYT6 803 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 FKTNO75072 461 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 PRKCGP05129 697 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 MGMTP16455 207 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 RPS19P39019 145 aaKnown RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 TNFRSF17Q02223 184 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 SLC35F3Q8IY50 421 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 CERS5Q8N5B7 392 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 OR4C15Q8NGM1 316 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 HS6ST2Q96MM7 605 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 RNF19AQ9NV58 838 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 CCL15-CCL14A0A0B4J2E2 113 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 GABARAPH6UMI1 98 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 SCAMP1O15126 338 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 SRPX2O60687 465 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 CSF3P09919 207 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 AK4P27144 223 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 PCP4P48539 62 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 CCL15Q16663 113 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 RPS26P11Q5JNZ5 115 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 PM20D1Q6GTS8 502 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 FAM83HQ6ZRV2 1179 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF561Q8N587 486 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 TOLLIPQ9H0E2 274 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF223Q9UK11 482 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 AK6Q9Y3D8 172 aaKnown RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 KHNYNO15037 678 aaKnown RBP6.65□□□□□ -1.35
SMC1A-201ENST00000322213 GNSP15586 552 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 GABRB1P18505 474 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 UBE2KP61086 200 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 MS4A13Q5J8X5 152 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 SOHLH1Q5JUK2 328 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 SSX7Q7RTT5 188 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF550Q7Z398 422 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 FNDC9Q8TBE3 224 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 CREB3L4Q8TEY5 395 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 PTPRQQ9UMZ3 2332 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 C1QTNF3-AMACRE9PGA6 284 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 RAB3DO95716 219 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 PMS2P2O95744 297 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 ITPKBP27987 946 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 HYAL2Q12891 473 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 RSU1Q15404 277 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 AGTRAPQ6RW13 159 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 AMZ2Q86W34 360 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 MFSD4AQ8N468 514 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 GPR152Q8TDT2 470 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 SMPDL3BQ92485 455 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 SMARCD2Q92925 531 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 ASAH2Q9NR71 780 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 CAMK2AQ9UQM7 478 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 C2orf16Q68DN1 1984 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 A0A1B0GUH1 482 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 ANHXE9PGG2 379 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 TMX2-CTNND1H3BSU7 103 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 CACNB4O00305 520 aaPredicted RBP6.65□□□□□ -1.35
SMC1A-201ENST00000322213 ZBTB7AO95365 584 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 GLP1RP43220 463 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 PGGT1BP53609 377 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 LRRC32Q14392 662 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 C18orf63Q68DL7 685 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 GPR155Q7Z3F1 870 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 CAMKVQ8NCB2 501 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 LGALS14Q8TCE9 139 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 PMM1Q92871 262 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 PTP4A1Q93096 173 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 SLC25A21Q9BQT8 299 aaPredicted RBP6.65□□□□□ -1.35
SMC1A-201ENST00000322213 CD84Q9UIB8 345 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 SIX4Q9UIU6 781 aa6.65□□□□□ -1.35
SMC1A-201ENST00000322213 WDR90Q96KV7 1748 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 H7BY64 318 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ZBTB48P10074 688 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 CD68P34810 354 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ITPRIPL2Q3MIP1 535 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 CATSPEREQ5SY80 951 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 LYPD8Q6UX82 237 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 CCDC190Q86UF4 302 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 C1orf87Q8N0U7 546 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 OR5P2Q8WZ92 322 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 RPL10LQ96L21 214 aaKnown RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SLC2A13Q96QE2 648 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 MED18Q9BUE0 208 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 WRAP53Q9BUR4 548 aaKnown RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 RCE1Q9Y256 329 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 MED16Q9Y2X0 877 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 NHSL1Q5SYE7 1610 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms