RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 HPGDP15428 266 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 ACVR2AP27037 513 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 SLC5A2P31639 672 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 SLC15A1P46059 708 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 PIGFQ07326 219 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 ZNF620Q6ZNG0 422 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 BRIX1Q8TDN6 353 aaKnown RBP16.4■□□□□ 0.22
RAB39A-201ENST00000320578 FAR1Q8WVX9 515 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 FCGR1BQ92637 280 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 FGF11Q92914 225 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 GAL3ST4Q96RP7 486 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 LMF1Q96S06 567 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 YIPF3Q9GZM5 350 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 CCDC90BQ9GZT6 254 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 MED17Q9NVC6 651 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 PTTG2Q9NZH5 202 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 CNIH4Q9P003 139 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 CCDC160A6NGH7 325 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 ZNF99A8MXY4 864 aaPredicted RBP16.39■□□□□ 0.21
RAB39A-201ENST00000320578 CDX4O14627 284 aaPredicted RBP16.39■□□□□ 0.21
RAB39A-201ENST00000320578 ADAM11O75078 769 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 IGF2P01344 180 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 MT-ND2P03891 347 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 NR0B1P51843 470 aaKnown RBP16.39■□□□□ 0.21
RAB39A-201ENST00000320578 RNF4P78317 190 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 E2F1Q01094 437 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 ACSM5Q6NUN0 579 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 B3GNT6Q6ZMB0 384 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 ZNF517Q6ZMY9 492 aaPredicted RBP16.39■□□□□ 0.21
RAB39A-201ENST00000320578 CPEB2Q7Z5Q1 589 aaKnown RBP16.39■□□□□ 0.21
RAB39A-201ENST00000320578 APCDD1LQ8NCL9 501 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 VMP1Q96GC9 406 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 CMKLR1Q99788 373 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 LAT2Q9GZY6 243 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 SELENONQ9NZV5 590 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 RPS6KB2Q9UBS0 482 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 R4GN57 208 aa16.39■□□□□ 0.21
RAB39A-201ENST00000320578 UNC119BA6NIH7 251 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 ALG1L2C9J202 215 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 CNOT3O75175 753 aaKnown RBP16.38■□□□□ 0.21
RAB39A-201ENST00000320578 REM1O75628 298 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 UBL4AP11441 157 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 IL12BP29460 328 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 GSTT1P30711 240 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 TMBIM6P55061 237 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 COPZ1P61923 177 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 SKP2Q13309 424 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 TBCEQ15813 527 aaPredicted RBP16.38■□□□□ 0.21
RAB39A-201ENST00000320578 ALG10BQ5I7T1 473 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 SYT6Q5T7P8 510 aaPredicted RBP16.38■□□□□ 0.21
RAB39A-201ENST00000320578 HSDL2Q6YN16 418 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 SHISA6Q6ZSJ9 500 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 AHSA2Q719I0 299 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 CLVS1Q8IUQ0 354 aaPredicted RBP16.38■□□□□ 0.21
RAB39A-201ENST00000320578 C9orf43Q8TAL5 461 aaPredicted RBP16.38■□□□□ 0.21
RAB39A-201ENST00000320578 RORBQ92753 470 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 ATOH1Q92858 354 aaPredicted RBP16.38■□□□□ 0.21
RAB39A-201ENST00000320578 SLC38A2Q96QD8 506 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 TSC22D3Q99576 134 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 LPAR4Q99677 370 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 CTRCQ99895 268 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 WDR77Q9BQA1 342 aaPredicted RBP16.38■□□□□ 0.21
RAB39A-201ENST00000320578 CRB3Q9BUF7 120 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 PLA2G12AQ9BZM1 189 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 SLC19A3Q9BZV2 496 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 LHPPQ9H008 270 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 EGLN3Q9H6Z9 239 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 ACOT13Q9NPJ3 140 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 ASCC3Q8N3C0 2202 aaKnown RBP16.38■□□□□ 0.21
RAB39A-201ENST00000320578 LOC102723996A0A087X1L8 192 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 OR6C70A6NIJ9 312 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 ZNF264O43296 627 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 PIP5K1CO60331 668 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 EIF4E2O60573 245 aaKnown RBP16.38■□□□□ 0.21
RAB39A-201ENST00000320578 HMGN1P05114 100 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 CD63P08962 238 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 NAGAP17050 411 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 SLC6A8P48029 635 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 RAB15P59190 212 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 PLCXD2Q0VAA5 305 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 TMEM44Q2T9K0 475 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 UBE2UQ5VVX9 321 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 OR8D4Q8NGM9 314 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 OMA1Q96E52 524 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 ADOQ96SZ5 270 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 ZPBPQ9BS86 351 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 DSN1Q9H410 356 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 C12orf10Q9HB07 376 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 TVP23BQ9NYZ1 205 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 GPN3Q9UHW5 284 aaPredicted RBP16.38■□□□□ 0.21
RAB39A-201ENST00000320578 ICAM5Q9UMF0 924 aa16.38■□□□□ 0.21
RAB39A-201ENST00000320578 RPL36Q9Y3U8 105 aaKnown RBP16.38■□□□□ 0.21
RAB39A-201ENST00000320578 A0A087WUJ7 227 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 TRIM64BA6NI03 449 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 CBFA2T3O75081 653 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 RCBTB2O95199 551 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 NTN1O95631 604 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 CCL4P13236 92 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 IFI30P13284 250 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 ABCD3P28288 659 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms