RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ZNF517Q6ZMY9 492 aaPredicted RBP11.49□□□□□ -0.57
RNF4-201ENST00000314289 ZNF321PQ8N8H1 164 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 ZFP41Q8N8Y5 198 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 TCTN2Q96GX1 697 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 AHCYL2Q96HN2 611 aaKnown RBP11.49□□□□□ -0.57
RNF4-201ENST00000314289 OPALINQ96PE5 141 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 PRSS27Q9BQR3 290 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 MED20Q9H944 212 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 TBC1D17Q9HA65 648 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 FOLH1BQ9HBA9 442 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 DUSP22Q9NRW4 184 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 RPL36Q9Y3U8 105 aaKnown RBP11.49□□□□□ -0.57
RNF4-201ENST00000314289 CEP192Q8TEP8 1941 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 A0A087WV62 115 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 A0A1B0GVT2 93 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 BRINP1O60477 761 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 MAKP20794 623 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 TGM4P49221 684 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 TBRG1Q3YBR2 411 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 MINDY4Q4G0A6 757 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 ZMAT1Q5H9K5 638 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 MANEAQ5SRI9 462 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 ARMC4Q5T2S8 1044 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 LHFPL3Q86UP9 236 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 UBQLNLQ8IYU4 475 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 RCBTB1Q8NDN9 531 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 OR52I1Q8NGK6 324 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 OR51Q1Q8NH59 317 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 TMEM131Q92545 1883 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 RELTQ969Z4 430 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 SLC30A2Q9BRI3 323 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 POLDIP3Q9BY77 421 aaKnown RBP11.49□□□□□ -0.57
RNF4-201ENST00000314289 POLR2J2Q9GZM3 115 aaKnown RBP11.49□□□□□ -0.57
RNF4-201ENST00000314289 NXF2Q9GZY0 626 aaKnown RBP11.49□□□□□ -0.57
RNF4-201ENST00000314289 CNOT2Q9NZN8 540 aaKnown RBP11.49□□□□□ -0.57
RNF4-201ENST00000314289 TBC1D24Q9ULP9 559 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 MRPS17Q9Y2R5 130 aaKnown RBP11.49□□□□□ -0.57
RNF4-201ENST00000314289 HRO43593 1189 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 RFPL3O75679 317 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 DBIP07108 87 aaKnown RBP11.49□□□□□ -0.57
RNF4-201ENST00000314289 IFI30P13284 250 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 SPHARQ15513 63 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 RANBP3LQ86VV4 465 aaPredicted RBP11.49□□□□□ -0.57
RNF4-201ENST00000314289 CADM2Q8N3J6 435 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 OR4F15Q8NGB8 312 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 OR51A7Q8NH64 312 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 GATAD2BQ8WXI9 593 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 RNFT2Q96EX2 444 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 TRMT61AQ96FX7 289 aaKnown RBP11.49□□□□□ -0.57
RNF4-201ENST00000314289 DGAT2Q96PD7 388 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 PDE7BQ9NP56 450 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 NLGN3Q9NZ94 848 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 YARS2Q9Y2Z4 477 aaKnown RBP11.49□□□□□ -0.57
RNF4-201ENST00000314289 CLDN16Q9Y5I7 305 aa11.49□□□□□ -0.57
RNF4-201ENST00000314289 TRAV27A0A087WT01 109 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 GPX5O75715 221 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 GSTM3P21266 225 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 IFNGR2P38484 337 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 NXPH1P58417 271 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 HNRNPKP61978 463 aaKnown RBP eCLIP11.48□□□□□ -0.57
RNF4-201ENST00000314289 CD300LDQ6UXZ3 194 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 NPSR1Q6W5P4 371 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 MBOAT2Q6ZWT7 520 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 TMEM151BQ8IW70 566 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 ANKK1Q8NFD2 765 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 CDX2Q99626 313 aaPredicted RBP11.48□□□□□ -0.57
RNF4-201ENST00000314289 MMP28Q9H239 520 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 HHATLQ9HCP6 504 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 PNO1Q9NRX1 252 aaKnown RBP11.48□□□□□ -0.57
RNF4-201ENST00000314289 MN1Q10571 1320 aaPredicted RBP11.48□□□□□ -0.57
RNF4-201ENST00000314289 TMEM150CB9EJG8 249 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 LMO7DNF2Z398 122 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 MYL12BO14950 172 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 SRPX2O60687 465 aaPredicted RBP11.48□□□□□ -0.57
RNF4-201ENST00000314289 SAGP10523 405 aaPredicted RBP11.48□□□□□ -0.57
RNF4-201ENST00000314289 CD1CP29017 333 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 TNFSF8P32971 234 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 CSTF2P33240 577 aaKnown RBP eCLIP11.48□□□□□ -0.57
RNF4-201ENST00000314289 GCGRP47871 477 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 ARPC4P59998 168 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 CFHR1Q03591 330 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 DECR1Q16698 335 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 NDUFA9Q16795 377 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 C1orf189Q5VU69 101 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 SHISA6Q6ZSJ9 500 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 ATCAYQ86WG3 371 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 UBE2J2Q8N2K1 259 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 FAM26EQ8N5C1 309 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 OR13C2Q8NGS9 318 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 OR4C3Q8NH37 302 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 C16orf52Q8NHV5 167 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 DNAJA3Q96EY1 480 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 NELL2Q99435 816 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 PRRG3Q9BZD7 231 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 OR10H1Q9Y4A9 318 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 A3GALT2U3KPV4 340 aa11.48□□□□□ -0.57
RNF4-201ENST00000314289 TRAPPC13A5PLN9 417 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 LRRN3E7EW58 273 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 CCRL2O00421 344 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 OR5F1O95221 314 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms