RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 SLC2A5P22732 501 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 GABRA3P34903 492 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 MNX1P50219 401 aaPredicted RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 TPMTP51580 245 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 ZNF41P51814 821 aaPredicted RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 AKR1C2P52895 323 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 CDKN2DP55273 166 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 SNU13P55769 128 aaKnown RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 TAS2R31P59538 309 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 CRYZQ08257 329 aaKnown RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 NRARPQ7Z6K4 114 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 SYNPRQ8TBG9 265 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 SLC7A13Q8TCU3 470 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 TFGQ92734 400 aaPredicted RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 MAL2Q969L2 176 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 PGAP3Q96FM1 320 aaPredicted RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 ALG8Q9BVK2 526 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 ZNF442Q9H7R0 627 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 SLAMF7Q9NQ25 335 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 IL20RAQ9UHF4 553 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 A0A1W2PS29 197 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 BHLHE40O14503 412 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 GAAP10253 952 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 LIPCP11150 499 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 SCAPQ12770 1279 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 SF3B4Q15427 424 aaKnown RBP eCLIP7.7□□□□□ -1.186e-7■■■■□ 24.9
VPS41-202ENST00000310301 C11orf91Q3C1V1 193 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 ZFP82Q8N141 532 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 AGBL5Q8NDL9 886 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 UTP4Q969X6 686 aaKnown RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 METTL17Q9H7H0 456 aaPredicted RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 SERTAD4Q9NUC0 356 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 HRASLS2Q9NWW9 162 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 ASB6Q9NWX5 421 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 NOX1Q9Y5S8 564 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 DNAJC15Q9Y5T4 150 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 MYH7P12883 1935 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 A6NL46 340 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 ACOT7O00154 380 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 ARAFP10398 606 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 EPHA1P21709 976 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 CD9P21926 228 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 HOXC8P31273 242 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 SORDQ00796 357 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 MAP4K2Q12851 820 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 OPCMLQ14982 345 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 TCEAL1Q15170 157 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 SGCAQ16586 387 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 C2orf76Q3KRA6 126 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 CLVS2Q5SYC1 327 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 GPRIN1Q7Z2K8 1008 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 C6orf120Q7Z4R8 191 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 B3GNT8Q7Z7M8 397 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 NLRP8Q86W28 1048 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 RBPMSQ93062 196 aaKnown RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 PGAM5Q96HS1 289 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 CNTNAP3Q9BZ76 1288 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 TSPAN10Q9H1Z9 355 aaPredicted RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 ADAM18Q9Y3Q7 739 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 SCAMP2O15127 329 aaKnown RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 GFRA3O60609 400 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 DNAJB6O75190 326 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 TXNDC12O95881 172 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 ZDHHC11BP0C7U3 371 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 FXYD4P59646 89 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 DCUN1D3Q8IWE4 304 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 ZC3H3Q8IXZ2 948 aaKnown RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 CLECL1Q8IZS7 167 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 ZNF454Q8N9F8 522 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 STEAP2Q8NFT2 490 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 SPRYD4Q8WW59 207 aaPredicted RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 HOXB13Q92826 284 aaPredicted RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 CRB3Q9BUF7 120 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 AGPAT4Q9NRZ5 378 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 HS3ST3A1Q9Y663 406 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 VIRMAQ69YN4 1812 aaKnown RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 CBR1P16152 277 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 TRIM23P36406 574 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 DLX5P56178 289 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 NDUFA6P56556 154 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 SH3BP2P78314 561 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 OR4D1Q15615 310 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 LCN10Q6JVE6 187 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 TMEM107Q6UX40 140 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 SCD5Q86SK9 330 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 SGPP2Q8IWX5 399 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 DTWD1Q8N5C7 304 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 OR4E2Q8NGC2 313 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 OR4K14Q8NGD5 310 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 OR4K13Q8NH42 304 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 ZBTB8AQ96BR9 441 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 FOXRED1Q96CU9 486 aaPredicted RBP7.7□□□□□ -1.18
VPS41-202ENST00000310301 BOLA1Q9Y3E2 137 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 USP3Q9Y6I4 520 aa7.7□□□□□ -1.18
VPS41-202ENST00000310301 TSPAN11A1L157 253 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 ANKRD34BA5PLL1 514 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 ZNF736B4DX44 427 aaPredicted RBP7.69□□□□□ -1.18
VPS41-202ENST00000310301 PRSS44E7EML9 344 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 SDC3O75056 442 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 BMP4P12644 408 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms