RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TNFSF14O43557 240 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 HPGDSO60760 199 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 GABRA5P31644 462 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 RABIFP47224 123 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 YPEL5P62699 121 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 SLC3A1Q07837 685 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 IL18Q14116 193 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 ZNHIT3Q15649 155 aaPredicted RBP10.7□□□□□ -0.7
PTPN2-201ENST00000309660 SLC25A30Q5SVS4 291 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 OAFQ86UD1 273 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 RBM12BQ8IXT5 1001 aaKnown RBP10.7□□□□□ -0.7
PTPN2-201ENST00000309660 ACBD7Q8N6N7 88 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 ZDHHC1Q8WTX9 485 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 FGF11Q92914 225 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 DNAJA3Q96EY1 480 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 DMRTB1Q96MA1 342 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 MIXL1Q9H2W2 232 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 ANKRD19PQ9H560 264 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 C2orf42Q9NWW7 574 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 A0A1W2PPK0 400 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 FAM25AB3EWG3 89 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 FAM25CB3EWG5 89 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 FAM25GB3EWG6 89 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 PRR23D1E9PI22 279 aaPredicted RBP10.7□□□□□ -0.7
PTPN2-201ENST00000309660 PRAMEF26H0Y7S4 382 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 MAGEB4O15481 346 aaPredicted RBP10.7□□□□□ -0.7
PTPN2-201ENST00000309660 ATP1B1P05026 303 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 KRT8P05787 483 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 IGHV4-34P06331 123 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 PRR23D2P0DMB1 279 aaPredicted RBP10.7□□□□□ -0.7
PTPN2-201ENST00000309660 APEX1P27695 318 aaKnown RBP10.7□□□□□ -0.7
PTPN2-201ENST00000309660 HTR1FP30939 366 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 CCR4P51679 360 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 CRYZQ08257 329 aaKnown RBP10.7□□□□□ -0.7
PTPN2-201ENST00000309660 EIF2B5Q13144 721 aaKnown RBP10.7□□□□□ -0.7
PTPN2-201ENST00000309660 TPBGQ13641 420 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 KCNJ8Q15842 424 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 POGLUT1Q8NBL1 392 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 OR4C6Q8NH72 309 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 CAPSLQ8WWF8 208 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 SPACA7Q96KW9 195 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 ALG8Q9BVK2 526 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 CLEC4AQ9UMR7 237 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 ATG2AQ2TAZ0 1938 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 CABIN1Q9Y6J0 2220 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 J3QLW9 94 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 RFPL3O75679 317 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 HLA-DPB1P04440 258 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 ZNF19P17023 458 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 ACVR1BP36896 505 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 EMDP50402 254 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 COPZ1P61923 177 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 BTG2P78543 158 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 BNC1Q01954 994 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 SCN1BQ07699 218 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 CRMP1Q14194 572 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 AMZ1Q400G9 498 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 ALG10BQ5I7T1 473 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 FAM27D1Q5T7N8 215 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 PRPF38BQ5VTL8 546 aaKnown RBP10.69□□□□□ -0.7
PTPN2-201ENST00000309660 ZNF517Q6ZMY9 492 aaPredicted RBP10.69□□□□□ -0.7
PTPN2-201ENST00000309660 QSOX2Q6ZRP7 698 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 SLC44A3Q8N4M1 653 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 UBASH3BQ8TF42 649 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 RIT1Q92963 219 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 TNFRSF13CQ96RJ3 184 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 LYRM4Q9HD34 91 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 DUSP22Q9NRW4 184 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 DTX4Q9Y2E6 619 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 ENTPD2Q9Y5L3 495 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 CACNA1CQ13936 2221 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 ARID1BQ8NFD5 2236 aaPredicted RBP10.69□□□□□ -0.7
PTPN2-201ENST00000309660 OR5K3A6NET4 321 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 C2CD4DB7Z1M9 353 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 PLOD3O60568 738 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 HOXC4P09017 264 aaPredicted RBP10.69□□□□□ -0.7
PTPN2-201ENST00000309660 MAOAP21397 527 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 LTBRP36941 435 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 ETV6P41212 452 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 CASP3P42574 277 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 INPP1P49441 399 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 FXYD6P3P58550 94 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 IDNKQ5T6J7 187 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 IL20RBQ6UXL0 311 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 RPTNQ6XPR3 784 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 ABI3BPQ7Z7G0 1075 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 SLC37A3Q8NCC5 494 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 ASB12Q8WXK4 309 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 AP3S1Q92572 193 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 ITPKCQ96DU7 683 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 MAP3K3Q99759 626 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 BEX2Q9BXY8 128 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 SRRQ9GZT4 340 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 MMP17Q9ULZ9 603 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 SF3B6Q9Y3B4 125 aaKnown RBP10.69□□□□□ -0.7
PTPN2-201ENST00000309660 MAU2Q9Y6X3 613 aa10.69□□□□□ -0.7
PTPN2-201ENST00000309660 IQCMA0A1B0GVH7 501 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 A0A1B0GWA3 101 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 SHISA3A0PJX4 238 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 RIIAD1A6NNX1 92 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms