RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 ERVK-25P63136 954 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 AKR1C1Q04828 323 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 YIF1BQ5BJH7 314 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 CDKL4Q5MAI5 379 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 FAM71E1Q6IPT2 247 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 TCTN3Q6NUS6 607 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 FAM111BQ6SJ93 734 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 CREB3L2Q70SY1 520 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 SIAH3Q8IW03 269 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 BBS1Q8NFJ9 593 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 OR13C5Q8NGS8 318 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 GPR174Q9BXC1 333 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 PIGUQ9H490 435 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 MED11Q9P086 117 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 KLHL21Q9UJP4 597 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 NAALAD2Q9Y3Q0 740 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 OR10H1Q9Y4A9 318 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 A0A1W2PPL8 197 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 B4DGG1 531 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 PLA2G10O15496 165 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 LILRB3O75022 631 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 EFCAB14O75071 495 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 EML2O95834 649 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 ARAFP10398 606 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 GSTM3P21266 225 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 VEGFCP49767 419 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 PRR5P85299 388 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 TRAM2Q15035 370 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 GRK1Q15835 563 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 OR4C11Q6IEV9 310 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 REM2Q8IYK8 340 aaPredicted RBP11.82□□□□□ -0.52
RETREG3-201ENST00000309428 SLC16A11Q8NCK7 471 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 ZNF471Q9BX82 626 aaPredicted RBP11.82□□□□□ -0.52
RETREG3-201ENST00000309428 CDCA4Q9BXL8 241 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 TPSD1Q9BZJ3 242 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 GABARAPL1Q9H0R8 117 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 PLCXD1Q9NUJ7 323 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 SLC39A1Q9NY26 324 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 FARSAQ9Y285 508 aaKnown RBP11.82□□□□□ -0.52
RETREG3-201ENST00000309428 OR10H2O60403 315 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 RNGTTO60942 597 aaKnown RBP11.81□□□□□ -0.52
RETREG3-201ENST00000309428 PTHLHP12272 177 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 CRYBB2P43320 205 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 XCR1P46094 333 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 PPP2CBP62714 309 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 PPP2CAP67775 309 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 EXOSC2Q13868 293 aaKnown RBP11.81□□□□□ -0.52
RETREG3-201ENST00000309428 NUDT18Q6ZVK8 323 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 ZER1Q7Z7L7 766 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 NUP43Q8NFH3 380 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 OR2T33Q8NG76 320 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 CD180Q99467 661 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 SLC6A15Q9H2J7 730 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 MTIF3Q9H2K0 278 aaKnown RBP11.81□□□□□ -0.52
RETREG3-201ENST00000309428 TCF7L1Q9HCS4 588 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 V9GYH0 126 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 EP300Q09472 2414 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-201ENST00000309428 SNRNP200O75643 2136 aaKnown RBP11.81□□□□□ -0.52
RETREG3-201ENST00000309428 ZAR1LA6NP61 321 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 MT-ND5P03915 603 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 ZNF888P0CJ79 500 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-201ENST00000309428 KHKP50053 298 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 MNX1P50219 401 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-201ENST00000309428 FBXW4P57775 412 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 ZNF793Q6ZN11 406 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 ZNF707Q96C28 371 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-201ENST00000309428 SLC17A9Q9BYT1 436 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 TMEM185BQ9H7F4 350 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 HPF1Q9NWY4 346 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 PHF11Q9UIL8 331 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 WDR45Q9Y484 360 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 CNOT1A5YKK6 2376 aaKnown RBP11.81□□□□□ -0.52
RETREG3-201ENST00000309428 A0A0G2JPF8 293 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 C1orf226A1L170 272 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 HNRNPCL3B7ZW38 293 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 SIGLEC5O15389 551 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 TCRBP04435 133 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 HNRNPCL4P0DMR1 293 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 RAB3BP20337 219 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 PKLRP30613 574 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 DUSP2Q05923 314 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 SIGLEC14Q08ET2 396 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 GNA13Q14344 377 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 PRSS41Q7RTY9 318 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 TAF8Q7Z7C8 310 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 FBXO15Q8NCQ5 510 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-201ENST00000309428 GPR32P1Q8NGA4 272 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 OR4K13Q8NH42 304 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 CASTOR1Q8WTX7 329 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.81□□□□□ -0.52
RETREG3-201ENST00000309428 NIPAL2Q9H841 368 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 NEUROD4Q9HD90 331 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 ACOXLQ9NUZ1 547 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 SAGE1Q9NXZ1 904 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 PLEKHA6Q9Y2H5 1048 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 CHST2Q9Y4C5 530 aa11.81□□□□□ -0.52
RETREG3-201ENST00000309428 SLC9B1P1A6NJY1 282 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 FFAR1O14842 300 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 SLC19A2O60779 497 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 HMGN1P05114 100 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms