RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 KCNJ8Q15842 424 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 RPS26P11Q5JNZ5 115 aaPredicted RBP12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ZNF551Q7Z340 670 aaPredicted RBP12.66□□□□□ -0.38
TRIM56-201ENST00000306085 LIPT1Q9Y234 373 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 TP53BP1Q12888 1972 aaPredicted RBP12.66□□□□□ -0.38
TRIM56-201ENST00000306085 PRAMEF27A3QJZ7 478 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ANKRD66B4E2M5 251 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 AP1G1O43747 822 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ADH1BP00325 375 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 CPT2P23786 658 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 MFGE8Q08431 387 aaPredicted RBP12.66□□□□□ -0.38
TRIM56-201ENST00000306085 PRAMEF9Q5VWM5 478 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 APOOLQ6UXV4 268 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 OR4N2Q8NGD1 307 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 P2RX6O15547 441 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 HLA-EP13747 358 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 PTP4A2Q12974 167 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 PRICKLE2Q7Z3G6 844 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 CRXO43186 299 aaPredicted RBP12.66□□□□□ -0.38
TRIM56-201ENST00000306085 IL2RGP31785 369 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 SLC7A9P82251 487 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ZNF765Q7L2R6 523 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 OR8J1Q8NGP2 316 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 SRPX2O60687 465 aaPredicted RBP12.66□□□□□ -0.38
TRIM56-201ENST00000306085 EBLN1P0CF75 366 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 HOXB2P14652 356 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 PSMB3P49720 205 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 PCLAFQ15004 111 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ZMAT1Q5H9K5 638 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ZNF704Q6ZNC4 412 aaPredicted RBP12.66□□□□□ -0.38
TRIM56-201ENST00000306085 CNEP1R1Q8N9A8 125 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 KDF1Q8NAX2 398 aaPredicted RBP12.66□□□□□ -0.38
TRIM56-201ENST00000306085 NTN4Q9HB63 628 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 NOX3Q9HBY0 568 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 HIDE1A8MVS5 230 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ANHXE9PGG2 379 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 DENRO43583 198 aaKnown RBP12.66□□□□□ -0.38
TRIM56-201ENST00000306085 NFYAP23511 347 aaPredicted RBP12.66□□□□□ -0.38
TRIM56-201ENST00000306085 NFYBP25208 207 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 SNCAP37840 140 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 JAM2P57087 298 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 TP53I3Q53FA7 332 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ZNF440Q8IYI8 595 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 C1orf127Q8N9H9 656 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ST8SIA2Q92186 375 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ACDQ96AP0 544 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ZMYND19Q96E35 227 aaPredicted RBP12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ZNF251Q9BRH9 671 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 TACR3P29371 465 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 PSMB10P40306 273 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 TMEM130Q8N3G9 435 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ADIPOR1Q96A54 375 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 NECAP1Q8NC96 275 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 DOCK7Q96N67 2140 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 SLC35D1Q9NTN3 355 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 MKS1Q9NXB0 559 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 TGOLN2O43493 480 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 PFKMP08237 780 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 METAP1DQ6UB28 335 aaPredicted RBP12.65□□□□□ -0.38
TRIM56-201ENST00000306085 CPNE4Q96A23 557 aaPredicted RBP12.65□□□□□ -0.38
TRIM56-201ENST00000306085 RANGRFQ9HD47 186 aaPredicted RBP12.65□□□□□ -0.38
TRIM56-201ENST00000306085 ZDHHC7Q9NXF8 308 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 KRBA1A5PL33 1030 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 MROH6A6NGR9 719 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 KCNK2O95069 426 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 AMTP48728 403 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 GLO1Q04760 184 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 COTL1Q14019 142 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 NMES1Q9C002 83 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 ATRNL1Q5VV63 1379 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 OR2M5A3KFT3 312 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 IRAK2O43187 625 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 CNTN5O94779 1100 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 OR2C1O95371 312 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 LYPLA2O95372 231 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 SORDQ00796 357 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 TATDN3Q17R31 274 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 VHLLQ6RSH7 139 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 ABHD12BQ7Z5M8 362 aaPredicted RBP12.65□□□□□ -0.38
TRIM56-201ENST00000306085 LACC1Q8IV20 430 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 ZDHHC11Q9H8X9 412 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 STEAP1Q9UHE8 339 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 UBIAD1Q9Y5Z9 338 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 GAPDHSO14556 408 aaPredicted RBP12.65□□□□□ -0.38
TRIM56-201ENST00000306085 HBE1P02100 147 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 NFATC3Q12968 1075 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 CNN3Q15417 329 aaKnown RBP12.65□□□□□ -0.38
TRIM56-201ENST00000306085 NUDT9Q9BW91 350 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 TMEM201Q5SNT2 666 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 CLVS2Q5SYC1 327 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 C1orf87Q8N0U7 546 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 HCAR1Q9BXC0 346 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 RIPK3Q9Y572 518 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 HNRNPH3P31942 346 aaKnown RBP12.65□□□□□ -0.38
TRIM56-201ENST00000306085 FAM180BQ6P0A1 224 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 MAMDC4Q6UXC1 1216 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 SERPINA11Q86U17 422 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 CSNK1A1LQ8N752 337 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRIM56-201ENST00000306085 OR5L1Q8NGL2 311 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms